RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 CDC73Q6P1J9 531 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 RHBDF2Q6PJF5 856 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 CENPIQ92674 756 aaPredicted RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 KCTD14Q9BQ13 255 aaPredicted RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 DYRK3O43781 588 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ZCCHC18P0CG32 403 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 NUDT2P50583 147 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 TMEM132BQ14DG7 1078 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 KLHDC10Q6PID8 442 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 RXFP2Q8WXD0 754 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 CGREF1Q99674 301 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 SRP72O76094 671 aaKnown RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 RAP2AP10114 183 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 RHOQP17081 205 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ITGALP20701 1170 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 CDH13P55290 713 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 DNAJB9Q9UBS3 223 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ZNF623O75123 536 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 XPAP23025 273 aaPredicted RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ALDH7A1P49419 539 aaKnown RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 MTTPP55157 894 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ARMC4Q5T2S8 1044 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 CYP4A22Q5TCH4 519 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 MYLK4Q86YV6 388 aaPredicted RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 TRPV1Q8NER1 839 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 PHYHIPQ92561 330 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 GPR101Q96P66 508 aaPredicted RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ANLNQ9NQW6 1124 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 TRMT6Q9UJA5 497 aaKnown RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 PIK3C2BO00750 1634 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ANKS3Q6ZW76 656 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ASZ1Q8WWH4 475 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 FCRL5Q96RD9 977 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 TMEM79Q9BSE2 394 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 SERPINI2O75830 405 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 BLVRAP53004 296 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 RABL3Q5HYI8 236 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ERAP2Q6P179 960 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 USP50Q70EL3 339 aaPredicted RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ACDQ96AP0 544 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 WRNIP1Q96S55 665 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 MTIF3Q9H2K0 278 aaKnown RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ADARB2Q9NS39 739 aaKnown RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 RGS20O76081 388 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 IL4RP24394 825 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 PGM5Q15124 567 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 PYHIN1Q6K0P9 492 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 CCM2LQ9NUG4 571 aaPredicted RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 A0A087X0B3 334 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 URADA6NGE7 173 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 GOLGA8SH3BPF8 625 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 FGFR4P22455 802 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 SLC5A9Q2M3M2 681 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 COG4Q9H9E3 785 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 IGLV3-22A0A075B6J6 115 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ENDOD1O94919 500 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 CTPS1P17812 591 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 KCNA5P22460 613 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 TMC7Q7Z402 723 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 CCDC90BQ9GZT6 254 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 MYOZ2Q9NPC6 264 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 VAPBO95292 243 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 TYMPP19971 482 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 CENPAP49450 140 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 TPGS2Q68CL5 300 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 CCDC36Q8IYA8 594 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 LMCD1Q9NZU5 365 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 SMNDC1O75940 238 aaKnown RBP eCLIP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 SPIRE1Q08AE8 756 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 FASTKQ14296 549 aaKnown RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 PLEKHO2Q8TD55 490 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ADAMTS16Q8TE57 1224 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 APOL6Q9BWW8 343 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 OR56A5P0C7T3 313 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 CHRM1P11229 460 aaPredicted RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 MAGEA10P43363 369 aaPredicted RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 HNRNPFP52597 415 aaKnown RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 HERVK_113P63132 956 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 OGFOD2Q6N063 350 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ERVK-6Q9BXR3 956 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ECDO95905 644 aaPredicted RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ZNF132P52740 706 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 LSAMPQ13449 338 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 TBCELQ5QJ74 424 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 AFTPHQ6ULP2 937 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 RBM12BQ8IXT5 1001 aaKnown RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 CBWD1Q9BRT8 395 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 PCDHGA11Q9Y5H2 935 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 E2F3O00716 465 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 NCALDP61601 193 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ITKQ08881 620 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 NOL9Q5SY16 702 aaKnown RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 RPRD1BQ9NQG5 326 aaKnown RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 SNX9Q9Y5X1 595 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 G3V2T6 193 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 KCNH1O95259 989 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 OTULINQ96BN8 352 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 TEKT5Q96M29 485 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 MAPKAP1Q9BPZ7 522 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms