RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 KLHL11Q9NVR0 708 aa22.31■■□□□ 1.16
SRM-201ENST00000376957 IMPACTQ9P2X3 320 aa22.31■■□□□ 1.16
SRM-201ENST00000376957 CNOT1A5YKK6 2376 aaKnown RBP22.3■■□□□ 1.16
SRM-201ENST00000376957 SPAARA0A1B0GVQ0 90 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 TSPAN11A1L157 253 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 MMP20O60882 483 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 SOCS5O75159 536 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 CCNCP24863 283 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 HADHBP55084 474 aaKnown RBP22.3■■□□□ 1.16
SRM-201ENST00000376957 ITKQ08881 620 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 GALNT2Q10471 571 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 PTK2BQ14289 1009 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 TMEM52BQ4KMG9 183 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 NCBP2-AS2Q69YL0 99 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 KYAT3Q6YP21 454 aaKnown RBP22.3■■□□□ 1.16
SRM-201ENST00000376957 Q6ZSR6 202 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 ABI3BPQ7Z7G0 1075 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 GLRX5Q86SX6 157 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 GAS2L3Q86XJ1 694 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 FAF2Q96CS3 445 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 IFT43Q96FT9 208 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 CAMK1GQ96NX5 476 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 NUDCD1Q96RS6 583 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 FZD3Q9NPG1 666 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 AMACRQ9UHK6 382 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 ITM2BQ9Y287 266 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 ATP8A1Q9Y2Q0 1164 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 EPN1Q9Y6I3 576 aaPredicted RBP22.3■■□□□ 1.16
SRM-201ENST00000376957 DNAH14Q0VDD8 3507 aa22.3■■□□□ 1.16
SRM-201ENST00000376957 A0A0A6YYK5 440 aaPredicted RBP22.29■■□□□ 1.16
SRM-201ENST00000376957 CA4P22748 312 aa22.29■■□□□ 1.16
SRM-201ENST00000376957 PMLP29590 882 aa22.29■■□□□ 1.16
SRM-201ENST00000376957 FAM193AP78312 1265 aa22.29■■□□□ 1.16
SRM-201ENST00000376957 IL9RQ01113 521 aa22.29■■□□□ 1.16
SRM-201ENST00000376957 FOXC1Q12948 553 aa22.29■■□□□ 1.16
SRM-201ENST00000376957 PRAMEF14Q5SWL7 426 aa22.29■■□□□ 1.16
SRM-201ENST00000376957 BZW1Q7L1Q6 419 aaKnown RBP22.29■■□□□ 1.16
SRM-201ENST00000376957 TP53INP2Q8IXH6 220 aa22.29■■□□□ 1.16
SRM-201ENST00000376957 CCNYQ8ND76 341 aa22.29■■□□□ 1.16
SRM-201ENST00000376957 FATE1Q969F0 183 aa22.29■■□□□ 1.16
SRM-201ENST00000376957 RNF157Q96PX1 679 aa22.29■■□□□ 1.16
SRM-201ENST00000376957 MGME1Q9BQP7 344 aa22.29■■□□□ 1.16
SRM-201ENST00000376957 WRAP53Q9BUR4 548 aaKnown RBP22.29■■□□□ 1.16
SRM-201ENST00000376957 POLR1EQ9GZS1 481 aaKnown RBP22.29■■□□□ 1.16
SRM-201ENST00000376957 PCDH12Q9NPG4 1184 aa22.29■■□□□ 1.16
SRM-201ENST00000376957 CA5BQ9Y2D0 317 aa22.29■■□□□ 1.16
SRM-201ENST00000376957 TP53BP1Q12888 1972 aaPredicted RBP22.29■■□□□ 1.16
SRM-201ENST00000376957 CFAP69A5D8W1 941 aa22.28■■□□□ 1.16
SRM-201ENST00000376957 H3BM21 787 aa22.28■■□□□ 1.16
SRM-201ENST00000376957 RIOK3O14730 519 aaKnown RBP22.28■■□□□ 1.16
SRM-201ENST00000376957 APOL1O14791 398 aa22.28■■□□□ 1.16
SRM-201ENST00000376957 MATN3O15232 486 aa22.28■■□□□ 1.16
SRM-201ENST00000376957 TNFSF14O43557 240 aa22.28■■□□□ 1.16
SRM-201ENST00000376957 MFSD11O43934 449 aa22.28■■□□□ 1.16
SRM-201ENST00000376957 LZTS3O60299 673 aaPredicted RBP22.28■■□□□ 1.16
SRM-201ENST00000376957 BUB1BO60566 1050 aaPredicted RBP22.28■■□□□ 1.16
SRM-201ENST00000376957 NDUFA10O95299 355 aa22.28■■□□□ 1.16
SRM-201ENST00000376957 KRT1P04264 644 aa22.28■■□□□ 1.16
SRM-201ENST00000376957 TNNT1P13805 278 aa22.28■■□□□ 1.16
SRM-201ENST00000376957 COMTP21964 271 aa22.28■■□□□ 1.16
SRM-201ENST00000376957 EPHA8P29322 1005 aaPredicted RBP22.28■■□□□ 1.16
SRM-201ENST00000376957 RGRP47804 291 aa22.28■■□□□ 1.16
SRM-201ENST00000376957 THOP1P52888 689 aa22.28■■□□□ 1.16
SRM-201ENST00000376957 NAP1L1P55209 391 aaKnown RBP22.28■■□□□ 1.16
SRM-201ENST00000376957 CLDN2P57739 230 aa22.28■■□□□ 1.16
SRM-201ENST00000376957 LRRC73Q5JTD7 316 aa22.28■■□□□ 1.16
SRM-201ENST00000376957 GCNT7Q6ZNI0 430 aa22.28■■□□□ 1.16
SRM-201ENST00000376957 SPATS2Q86XZ4 545 aaKnown RBP22.28■■□□□ 1.16
SRM-201ENST00000376957 PDCD6IPQ8WUM4 868 aaKnown RBP22.28■■□□□ 1.16
SRM-201ENST00000376957 RAPGEF5Q92565 580 aa22.28■■□□□ 1.16
SRM-201ENST00000376957 TSGA13Q96PP4 275 aa22.28■■□□□ 1.16
SRM-201ENST00000376957 FTSJ1Q9UET6 329 aa22.28■■□□□ 1.16
SRM-201ENST00000376957 PCNX2A6NKB5 2137 aa22.28■■□□□ 1.16
SRM-201ENST00000376957 NEMP2A6NFY4 417 aa22.27■■□□□ 1.16
SRM-201ENST00000376957 PSTPIP1O43586 416 aa22.27■■□□□ 1.16
SRM-201ENST00000376957 CBFA2T3O75081 653 aa22.27■■□□□ 1.16
SRM-201ENST00000376957 CDC25BP30305 580 aa22.27■■□□□ 1.16
SRM-201ENST00000376957 YPEL5P62699 121 aa22.27■■□□□ 1.16
SRM-201ENST00000376957 SHC2P98077 582 aa22.27■■□□□ 1.16
SRM-201ENST00000376957 OR13H1Q8NG92 308 aa22.27■■□□□ 1.16
SRM-201ENST00000376957 SAP25Q8TEE9 199 aa22.27■■□□□ 1.16
SRM-201ENST00000376957 ECHDC3Q96DC8 303 aa22.27■■□□□ 1.16
SRM-201ENST00000376957 BAG1Q99933 345 aaPredicted RBP22.27■■□□□ 1.16
SRM-201ENST00000376957 NT5MQ9NPB1 228 aa22.27■■□□□ 1.16
SRM-201ENST00000376957 KCTD5Q9NXV2 234 aa22.27■■□□□ 1.16
SRM-201ENST00000376957 GGT7Q9UJ14 662 aa22.27■■□□□ 1.16
SRM-201ENST00000376957 ALG6Q9Y672 507 aa22.27■■□□□ 1.16
SRM-201ENST00000376957 DOCK9Q9BZ29 2069 aa22.27■■□□□ 1.16
SRM-201ENST00000376957 PEX11BO96011 259 aa22.26■■□□□ 1.15
SRM-201ENST00000376957 CCNB1P14635 433 aa22.26■■□□□ 1.15
SRM-201ENST00000376957 HNRNPKP61978 463 aaKnown RBP eCLIP22.26■■□□□ 1.15
SRM-201ENST00000376957 TFDP2Q14188 446 aa22.26■■□□□ 1.15
SRM-201ENST00000376957 FGL2Q14314 439 aa22.26■■□□□ 1.15
SRM-201ENST00000376957 LRRC14Q15048 493 aa22.26■■□□□ 1.15
SRM-201ENST00000376957 PDK1Q15118 436 aa22.26■■□□□ 1.15
SRM-201ENST00000376957 DAAM2Q86T65 1068 aa22.26■■□□□ 1.15
SRM-201ENST00000376957 GATAD2AQ86YP4 633 aa22.26■■□□□ 1.15
SRM-201ENST00000376957 CPNE8Q86YQ8 564 aa22.26■■□□□ 1.15
SRM-201ENST00000376957 RFX6Q8HWS3 928 aa22.26■■□□□ 1.15
SRM-201ENST00000376957 TEX26Q8N6G2 289 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms