RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 ART3Q13508 389 aa10.76□□□□□ -0.69
ABCF1-202ENST00000376545 RWDD4Q6NW29 188 aaKnown RBP10.76□□□□□ -0.69
ABCF1-202ENST00000376545 TADA1Q96BN2 335 aa10.76□□□□□ -0.69
ABCF1-202ENST00000376545 ELMO2Q96JJ3 720 aa10.76□□□□□ -0.69
ABCF1-202ENST00000376545 C1orf74Q96LT6 269 aa10.76□□□□□ -0.69
ABCF1-202ENST00000376545 UHRF1Q96T88 793 aaPredicted RBP10.76□□□□□ -0.69
ABCF1-202ENST00000376545 NPAS2Q99743 824 aa10.76□□□□□ -0.69
ABCF1-202ENST00000376545 OLFM1Q99784 485 aa10.76□□□□□ -0.69
ABCF1-202ENST00000376545 Q9H521 79 aa10.76□□□□□ -0.69
ABCF1-202ENST00000376545 TNFRSF12AQ9NP84 129 aa10.76□□□□□ -0.69
ABCF1-202ENST00000376545 TBC1D13Q9NVG8 400 aa10.76□□□□□ -0.69
ABCF1-202ENST00000376545 HACD3Q9P035 362 aa10.76□□□□□ -0.69
ABCF1-202ENST00000376545 CD300AQ9UGN4 299 aa10.76□□□□□ -0.69
ABCF1-202ENST00000376545 PADI4Q9UM07 663 aa10.76□□□□□ -0.69
ABCF1-202ENST00000376545 SCN10AQ9Y5Y9 1956 aa10.76□□□□□ -0.69
ABCF1-202ENST00000376545 A8MT66 165 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 FBP2O00757 339 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 AURKAO14965 403 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 ODC1P11926 461 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 ENO3P13929 434 aaPredicted RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 ZNF26P17031 533 aaPredicted RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 KCNA5P22460 613 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 YY1P25490 414 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 PMLP29590 882 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 MYBPC1Q00872 1141 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 TRAP1Q12931 704 aaKnown RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 APOFQ13790 326 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 TRIM25Q14258 630 aaKnown RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 SQLEQ14534 574 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 C9orf131Q5VYM1 1079 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 ZNF470Q6ECI4 717 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 NEPROQ6NW34 567 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 HACD2Q6Y1H2 254 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 SATL1Q86VE3 508 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 LRRTM3Q86VH5 581 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 SPATA6LQ8N4H0 392 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 RTL3Q8N8U3 475 aaKnown RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 USP13Q92995 863 aaPredicted RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 MARK4Q96L34 752 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 RBM38Q9H0Z9 239 aaKnown RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 UNC93B1Q9H1C4 597 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 NOL6Q9H6R4 1146 aaKnown RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 COPS7BQ9H9Q2 264 aaPredicted RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 PCDHGB4Q9UN71 923 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 PCDHGB5Q9Y5G0 923 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 TRPV2Q9Y5S1 764 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 AP4B1Q9Y6B7 739 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 RNASEH2AO75792 299 aaKnown RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 IPO13O94829 963 aaKnown RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 PAX3P23760 479 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 SLC26A3P40879 764 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 RPL5P46777 297 aaKnown RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 ATP4BP51164 291 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 CLCN5P51795 746 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 C1QTNF8P60827 252 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 BEX3Q00994 111 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 ACAP2Q15057 778 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 RBM20Q5T481 1227 aaKnown RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 NXNQ6DKJ4 435 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 CYHR1Q6ZMK1 362 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 ZNF683Q8IZ20 524 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 ALDH16A1Q8IZ83 802 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 LPPQ93052 612 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 DGCR14Q96DF8 476 aaKnown RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 SLC25A51Q9H1U9 297 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 MRPL40Q9NQ50 206 aaKnown RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 RBM22Q9NW64 420 aaKnown RBP eCLIP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 CACNA2D2Q9NY47 1150 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 MROH6A6NGR9 719 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 VILLO15195 856 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 LTA4HP09960 611 aaKnown RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 CCR1P32246 355 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 MSX2P35548 267 aaPredicted RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 CHRNA4P43681 627 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 PGFP49763 221 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 SCNN1GP51170 649 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 SH3BGRP55822 239 aaPredicted RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 PSME3P61289 254 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 MGAT3Q09327 533 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 STX5Q13190 355 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 FAM83EQ2M2I3 478 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 ZNF789Q5FWF6 425 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 GK5Q6ZS86 529 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 CCNYL1Q8N7R7 359 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 OR10T2Q8NGX3 314 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 SCAMP5Q8TAC9 235 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 RNF34Q969K3 372 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 L3HYPDHQ96EM0 354 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 IMP4Q96G21 291 aaKnown RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 FCRL2Q96LA5 508 aaPredicted RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 MRPL1Q9BYD6 325 aaKnown RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 MRPS26Q9BYN8 205 aaKnown RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 SENP6Q9GZR1 1112 aaPredicted RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 EML4Q9HC35 981 aaKnown RBP10.75□□□□□ -0.69
ABCF1-202ENST00000376545 VCX3AQ9NNX9 186 aa10.75□□□□□ -0.69
ABCF1-202ENST00000376545 TCRBV3S1A0A5B6 114 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 HEATR9A2RTY3 570 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 NEMP2A6NFY4 417 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 ZNF623O75123 536 aa10.74□□□□□ -0.69
ABCF1-202ENST00000376545 RBP1P09455 135 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms