RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 MAP3K6O95382 1288 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 PRKCGP05129 697 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 EPHA8P29322 1005 aaPredicted RBP14.39□□□□□ -0.11
CLCN6-203ENST00000376490 MAN1A1P33908 653 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 SERPINB6P35237 376 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 ARHGAP25P42331 645 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 MAGEA1P43355 309 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 BCL2L1Q07817 233 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 PAFAH1B3Q15102 231 aaKnown RBP14.39□□□□□ -0.11
CLCN6-203ENST00000376490 TMEM52BQ4KMG9 183 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 ZNF542PQ5EBM4 170 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 ZFYVE27Q5T4F4 411 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 CFAP58Q5T655 872 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 NCBP2-AS2Q69YL0 99 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 KANSL1Q7Z3B3 1105 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 PTAR1Q7Z6K3 402 aaPredicted RBP14.39□□□□□ -0.11
CLCN6-203ENST00000376490 ZSCAN30Q86W11 494 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 MAP7D3Q8IWC1 876 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 SLC22A18ASQ8N1D0 253 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 OXR1Q8N573 874 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 ATPAF2Q8N5M1 289 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 EID2Q8N6I1 236 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 CXorf40AQ8TE69 158 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 LRRN4Q8WUT4 740 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 CENPTQ96BT3 561 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 PCDH12Q9NPG4 1184 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 TOR4AQ9NXH8 423 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 INTUQ9ULD6 942 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 COQ6Q9Y2Z9 468 aa14.39□□□□□ -0.11
CLCN6-203ENST00000376490 GOLGA4Q13439 2230 aaKnown RBP14.38□□□□□ -0.11
CLCN6-203ENST00000376490 TPRP12270 2363 aaKnown RBP14.38□□□□□ -0.11
CLCN6-203ENST00000376490 TRAFD1O14545 582 aaPredicted RBP14.38□□□□□ -0.11
CLCN6-203ENST00000376490 RIOK3O14730 519 aaKnown RBP14.38□□□□□ -0.11
CLCN6-203ENST00000376490 YKT6O15498 198 aa14.38□□□□□ -0.11
CLCN6-203ENST00000376490 TNFSF14O43557 240 aa14.38□□□□□ -0.11
CLCN6-203ENST00000376490 MFSD11O43934 449 aa14.38□□□□□ -0.11
CLCN6-203ENST00000376490 SERPINA4P29622 427 aa14.38□□□□□ -0.11
CLCN6-203ENST00000376490 SUOXP51687 545 aa14.38□□□□□ -0.11
CLCN6-203ENST00000376490 ELP6Q0PNE2 266 aa14.38□□□□□ -0.11
CLCN6-203ENST00000376490 ZNF235Q14590 738 aa14.38□□□□□ -0.11
CLCN6-203ENST00000376490 MARC1Q5VT66 337 aa14.38□□□□□ -0.11
CLCN6-203ENST00000376490 BRAT1Q6PJG6 821 aa14.38□□□□□ -0.11
CLCN6-203ENST00000376490 SLC25A45Q8N413 288 aa14.38□□□□□ -0.11
CLCN6-203ENST00000376490 PQLC3Q8N755 202 aa14.38□□□□□ -0.11
CLCN6-203ENST00000376490 FAM174AQ8TBP5 190 aa14.38□□□□□ -0.11
CLCN6-203ENST00000376490 RFFLQ8WZ73 363 aa14.38□□□□□ -0.11
CLCN6-203ENST00000376490 FAF2Q96CS3 445 aa14.38□□□□□ -0.11
CLCN6-203ENST00000376490 ECHDC3Q96DC8 303 aa14.38□□□□□ -0.11
CLCN6-203ENST00000376490 MRFAP1L1Q96HT8 127 aa14.38□□□□□ -0.11
CLCN6-203ENST00000376490 ZNF670Q9BS34 389 aa14.38□□□□□ -0.11
CLCN6-203ENST00000376490 MBNL1Q9NR56 388 aaKnown RBP14.38□□□□□ -0.11
CLCN6-203ENST00000376490 KLK13Q9UKR3 277 aa14.38□□□□□ -0.11
CLCN6-203ENST00000376490 TFR2Q9UP52 801 aa14.38□□□□□ -0.11
CLCN6-203ENST00000376490 APOBEC2Q9Y235 224 aaKnown RBP14.38□□□□□ -0.11
CLCN6-203ENST00000376490 HYOU1Q9Y4L1 999 aa14.38□□□□□ -0.11
CLCN6-203ENST00000376490 PCDHGC4Q9Y5F7 938 aa14.38□□□□□ -0.11
CLCN6-203ENST00000376490 LRP4O75096 1905 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 A8MX80 341 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 TRIM16O95361 564 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 LCA5LO95447 670 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 LDOC1O95751 146 aaPredicted RBP14.37□□□□□ -0.11
CLCN6-203ENST00000376490 TNNT1P13805 278 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 CR2P20023 1033 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 GARSP41250 739 aaKnown RBP14.37□□□□□ -0.11
CLCN6-203ENST00000376490 MMP13P45452 471 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 MAXP61244 160 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 AP1S1P61966 158 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 GALNT2Q10471 571 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 SLC10A2Q12908 348 aaPredicted RBP14.37□□□□□ -0.11
CLCN6-203ENST00000376490 FZD2Q14332 565 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 TCEAL1Q15170 157 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 TPRG1LQ5T0D9 272 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 KYAT3Q6YP21 454 aaKnown RBP14.37□□□□□ -0.11
CLCN6-203ENST00000376490 RAB44Q7Z6P3 723 aaPredicted RBP14.37□□□□□ -0.11
CLCN6-203ENST00000376490 DCP2Q8IU60 420 aaKnown RBP14.37□□□□□ -0.11
CLCN6-203ENST00000376490 LRRC49Q8IUZ0 686 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 PAF1Q8N7H5 531 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 NSMCE1Q8WV22 266 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 ADAMTS14Q8WXS8 1223 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 RNF157Q96PX1 679 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 NUDCD1Q96RS6 583 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 NOD2Q9HC29 1040 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 SCUBE2Q9NQ36 999 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 GPR27Q9NS67 375 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 UCKL1Q9NWZ5 548 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 FTSJ1Q9UET6 329 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 ATP8A1Q9Y2Q0 1164 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 PCDHA13Q9Y5I0 950 aa14.37□□□□□ -0.11
CLCN6-203ENST00000376490 SPTY2D1-AS1A0A0U1RR47 76 aa14.36□□□□□ -0.11
CLCN6-203ENST00000376490 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.36□□□□□ -0.11
CLCN6-203ENST00000376490 LRRD1A4D1F6 860 aa14.36□□□□□ -0.11
CLCN6-203ENST00000376490 C3orf70A6NLC5 250 aaPredicted RBP14.36□□□□□ -0.11
CLCN6-203ENST00000376490 DGKAP23743 735 aa14.36□□□□□ -0.11
CLCN6-203ENST00000376490 IGFALSP35858 605 aa14.36□□□□□ -0.11
CLCN6-203ENST00000376490 HSPA9P38646 679 aaKnown RBP14.36□□□□□ -0.11
CLCN6-203ENST00000376490 MMP12P39900 470 aa14.36□□□□□ -0.11
CLCN6-203ENST00000376490 NOP2P46087 812 aaKnown RBP14.36□□□□□ -0.11
CLCN6-203ENST00000376490 RABIFP47224 123 aa14.36□□□□□ -0.11
CLCN6-203ENST00000376490 LIG3P49916 1009 aa14.36□□□□□ -0.11
CLCN6-203ENST00000376490 PFN3P60673 137 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms