RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 GPR78Q96P69 363 aa15.31■□□□□ 0.04
MSH5-203ENST00000375750 TMEM79Q9BSE2 394 aa15.31■□□□□ 0.04
MSH5-203ENST00000375750 IL22Q9GZX6 179 aa15.31■□□□□ 0.04
MSH5-203ENST00000375750 POMKQ9H5K3 350 aa15.31■□□□□ 0.04
MSH5-203ENST00000375750 NOD1Q9Y239 953 aa15.31■□□□□ 0.04
MSH5-203ENST00000375750 ARHGEF37A1IGU5 675 aa15.31■□□□□ 0.04
MSH5-203ENST00000375750 XPOTO43592 962 aaKnown RBP15.31■□□□□ 0.04
MSH5-203ENST00000375750 MGEA5O60502 916 aa15.31■□□□□ 0.04
MSH5-203ENST00000375750 HOXD10P28358 340 aa15.31■□□□□ 0.04
MSH5-203ENST00000375750 ETFBP38117 255 aa15.31■□□□□ 0.04
MSH5-203ENST00000375750 TAF6P49848 677 aa15.31■□□□□ 0.04
MSH5-203ENST00000375750 C1QTNF8P60827 252 aa15.31■□□□□ 0.04
MSH5-203ENST00000375750 YBX1P67809 324 aaKnown RBP15.31■□□□□ 0.04
MSH5-203ENST00000375750 IKBKEQ14164 716 aa15.31■□□□□ 0.04
MSH5-203ENST00000375750 RALGAPA2Q2PPJ7 1873 aa15.31■□□□□ 0.04
MSH5-203ENST00000375750 TMEM259Q4ZIN3 620 aa15.31■□□□□ 0.04
MSH5-203ENST00000375750 NOMO2Q5JPE7 1267 aa15.31■□□□□ 0.04
MSH5-203ENST00000375750 KIAA0319Q5VV43 1072 aa15.31■□□□□ 0.04
MSH5-203ENST00000375750 UNC93AQ86WB7 457 aa15.31■□□□□ 0.04
MSH5-203ENST00000375750 CRYBG2Q8N1P7 616 aa15.31■□□□□ 0.04
MSH5-203ENST00000375750 CNTD1Q8N815 330 aa15.31■□□□□ 0.04
MSH5-203ENST00000375750 PCSK9Q8NBP7 692 aaKnown RBP15.31■□□□□ 0.04
MSH5-203ENST00000375750 ZNF419Q96HQ0 510 aaPredicted RBP15.31■□□□□ 0.04
MSH5-203ENST00000375750 PPP1R10Q96QC0 940 aaKnown RBP15.31■□□□□ 0.04
MSH5-203ENST00000375750 GBA3Q9H227 469 aa15.31■□□□□ 0.04
MSH5-203ENST00000375750 CHST12Q9NRB3 414 aa15.31■□□□□ 0.04
MSH5-203ENST00000375750 ZNF839A8K0R7 811 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 TRIM38O00635 465 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 CST5P28325 142 aaPredicted RBP15.3■□□□□ 0.04
MSH5-203ENST00000375750 SOX11P35716 441 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 TKTL1P51854 596 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 ACLYP53396 1101 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 ZNF789Q5FWF6 425 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 RNF180Q86T96 592 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 HERC6Q8IVU3 1022 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 APPL2Q8NEU8 664 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 HEXDCQ8WVB3 486 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 TSNARE1Q96NA8 513 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 ULBP1Q9BZM6 244 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 TRIM8Q9BZR9 551 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 IL1RL2Q9HB29 575 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 FBRSL1Q9HCM7 1045 aaKnown RBP15.3■□□□□ 0.04
MSH5-203ENST00000375750 TMEM30AQ9NV96 361 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 VPS28Q9UK41 221 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 PDLIM1O00151 329 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 GPR182O15218 404 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 DAB1O75553 588 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 YWHAQP27348 245 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 NOS2P35228 1153 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 RPL34P49207 117 aaKnown RBP15.3■□□□□ 0.04
MSH5-203ENST00000375750 NR1H2P55055 460 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 CSE1LP55060 971 aaKnown RBP15.3■□□□□ 0.04
MSH5-203ENST00000375750 TAS2R39P59534 338 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 SMYD5Q6GMV2 418 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 DUS1LQ6P1R4 473 aaKnown RBP15.3■□□□□ 0.04
MSH5-203ENST00000375750 TRIM67Q6ZTA4 783 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 B3GALNT2Q8NCR0 500 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 ELMO2Q96JJ3 720 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 ZNF560Q96MR9 790 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 MED10Q9BTT4 135 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 RHOJQ9H4E5 214 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 LRRC4Q9HBW1 653 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 WDR6Q9NNW5 1121 aaKnown RBP15.3■□□□□ 0.04
MSH5-203ENST00000375750 GDAP2Q9NXN4 497 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 RCOR3Q9P2K3 495 aaPredicted RBP15.3■□□□□ 0.04
MSH5-203ENST00000375750 ACOT9Q9Y305 439 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 FAM95CA0A1B0GW59 222 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 FAM149AA5PLN7 773 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 GNAO1P09471 354 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 CHRNA4P43681 627 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 CSRP3P50461 194 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 ADARP55265 1226 aaKnown RBP15.3■□□□□ 0.04
MSH5-203ENST00000375750 PPIDQ08752 370 aaKnown RBP15.3■□□□□ 0.04
MSH5-203ENST00000375750 SLC12A1Q13621 1099 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 CSHL1Q14406 222 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 RBM20Q5T481 1227 aaKnown RBP15.3■□□□□ 0.04
MSH5-203ENST00000375750 AGMOQ6ZNB7 445 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 CATSPER1Q8NEC5 780 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 IPMKQ8NFU5 416 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 PHF21BQ96EK2 531 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 RPL10LQ96L21 214 aaKnown RBP15.3■□□□□ 0.04
MSH5-203ENST00000375750 HSFY1Q96LI6 401 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 RHOBTB2Q9BYZ6 727 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 FAM124BQ9H5Z6 455 aaPredicted RBP15.3■□□□□ 0.04
MSH5-203ENST00000375750 OLAHQ9NV23 265 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 GIMAP2Q9UG22 337 aa15.3■□□□□ 0.04
MSH5-203ENST00000375750 TDRKHQ9Y2W6 561 aaKnown RBP15.3■□□□□ 0.04
MSH5-203ENST00000375750 TIMM13Q9Y5L4 95 aaPredicted RBP15.3■□□□□ 0.04
MSH5-203ENST00000375750 ARL5CA6NH57 179 aa15.29■□□□□ 0.04
MSH5-203ENST00000375750 SAC3D1A6NKF1 404 aa15.29■□□□□ 0.04
MSH5-203ENST00000375750 H2AFYO75367 372 aaKnown RBP15.29■□□□□ 0.04
MSH5-203ENST00000375750 USP17L7P0C7H9 530 aa15.29■□□□□ 0.04
MSH5-203ENST00000375750 ACADSBP45954 432 aa15.29■□□□□ 0.04
MSH5-203ENST00000375750 VEGFBP49765 207 aa15.29■□□□□ 0.04
MSH5-203ENST00000375750 APLP1P51693 650 aa15.29■□□□□ 0.04
MSH5-203ENST00000375750 SULT2A1Q06520 285 aa15.29■□□□□ 0.04
MSH5-203ENST00000375750 TRIM25Q14258 630 aaKnown RBP15.29■□□□□ 0.04
MSH5-203ENST00000375750 REP15Q6BDI9 236 aa15.29■□□□□ 0.04
MSH5-203ENST00000375750 CLEC6AQ6EIG7 209 aa15.29■□□□□ 0.04
MSH5-203ENST00000375750 REM2Q8IYK8 340 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms