RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 PFDN1O60925 122 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 ERVK-10P10266 1014 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 CDK4P11802 303 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 PIK3R1P27986 724 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 MSX2P35548 267 aaPredicted RBP17.07■□□□□ 0.32
PHF1-202ENST00000374516 ZNF135P52742 658 aaPredicted RBP17.07■□□□□ 0.32
PHF1-202ENST00000374516 THOP1P52888 689 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 EFEMP1Q12805 493 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 USP41Q3LFD5 358 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 OTOP3Q7RTS5 596 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 CMC1Q7Z7K0 106 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 MIB1Q86YT6 1006 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 LILRA2Q8N149 483 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 PLD6Q8N2A8 252 aaKnown RBP17.07■□□□□ 0.32
PHF1-202ENST00000374516 ZSCAN18Q8TBC5 510 aaPredicted RBP17.07■□□□□ 0.32
PHF1-202ENST00000374516 DDI1Q8WTU0 396 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 MLPHQ9BV36 600 aaPredicted RBP17.07■□□□□ 0.32
PHF1-202ENST00000374516 FBXO44Q9H4M3 255 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 SNX15Q9NRS6 342 aa17.07■□□□□ 0.32
PHF1-202ENST00000374516 BPTFQ12830 3046 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 KCNU1A8MYU2 1149 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 AP2A1O95782 977 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 GALTP07902 379 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 FAM58BPP0C7Q3 252 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 XRCC1P18887 633 aaPredicted RBP17.06■□□□□ 0.32
PHF1-202ENST00000374516 FGFR3P22607 806 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 CYP2C18P33260 490 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 GP5P40197 560 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 COL4A4P53420 1690 aaPredicted RBP17.06■□□□□ 0.32
PHF1-202ENST00000374516 MS4A2Q01362 244 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 PPP2R5DQ14738 602 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 PIGGQ5H8A4 983 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 C6orf52Q5T4I8 152 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 ARTNQ5T4W7 220 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 PAOXQ6QHF9 649 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 SNX32Q86XE0 403 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 ARHGAP12Q8IWW6 846 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 CNTD1Q8N815 330 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 TDRD5Q8NAT2 981 aaKnown RBP17.06■□□□□ 0.32
PHF1-202ENST00000374516 BCL7CQ8WUZ0 217 aaPredicted RBP17.06■□□□□ 0.32
PHF1-202ENST00000374516 TEKT5Q96M29 485 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 SERPINB11Q96P15 392 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 SLC39A8Q9C0K1 460 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 BRD8Q9H0E9 1235 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 GBA3Q9H227 469 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 TIMMDC1Q9NPL8 285 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 VPS28Q9UK41 221 aa17.06■□□□□ 0.32
PHF1-202ENST00000374516 MYOCOSA0A1B0GUC4 107 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 E9PAM4 449 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 G3V2L1 256 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 PITPNM1O00562 1244 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 TPH1P17752 444 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 PCSK6P29122 969 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 DUSP4Q13115 394 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 APOFQ13790 326 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 CYLC2Q14093 348 aaPredicted RBP17.05■□□□□ 0.32
PHF1-202ENST00000374516 PPM1LQ5SGD2 360 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 GRTP1Q5TC63 336 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 BORAQ6PGQ7 559 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 PRSS55Q6UWB4 352 aaPredicted RBP17.05■□□□□ 0.32
PHF1-202ENST00000374516 RP9Q8TA86 221 aaKnown RBP17.05■□□□□ 0.32
PHF1-202ENST00000374516 AGR3Q8TD06 166 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 LZICQ8WZA0 190 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 FBXO32Q969P5 355 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 ZNF419Q96HQ0 510 aaPredicted RBP17.05■□□□□ 0.32
PHF1-202ENST00000374516 CNDP1Q96KN2 507 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 RNF208Q9H0X6 261 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 BCAP29Q9UHQ4 241 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 VANGL2Q9ULK5 521 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 RPS6KL1Q9Y6S9 549 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 LAMA3Q16787 3333 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 GOLGA8QA0A0J9YX86 632 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 MTMR11A4FU01 709 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 GOLGA8OA6NCC3 632 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 GOLGA8NF8WBI6 632 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 MTSS1O43312 755 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 VNN2O95498 520 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 CAPNS1P04632 268 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 CCDC166P0CW27 439 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 YWHAQP27348 245 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 SCNN1BP51168 640 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 NR1H2P55055 460 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 CDKL1Q00532 357 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 CREB5Q02930 508 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 TAF10Q12962 218 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 CERCAMQ5T4B2 595 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 PIK3R6Q5UE93 754 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 MANEALQ5VSG8 457 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 BNC2Q6ZN30 1099 aaPredicted RBP17.05■□□□□ 0.32
PHF1-202ENST00000374516 NPAS4Q8IUM7 802 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 CRIPAKQ8N1N5 446 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 GALNT4Q8N4A0 578 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 DCLK2Q8N568 766 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 SPATA22Q8NHS9 363 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 DPF3Q92784 378 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 CATSPER2Q96P56 530 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 NAT9Q9BTE0 207 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 MRPL1Q9BYD6 325 aaKnown RBP17.05■□□□□ 0.32
PHF1-202ENST00000374516 HIPK3Q9H422 1215 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 WDR55Q9H6Y2 383 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms