RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 MYL4P12829 197 aa12.2□□□□□ -0.46
HMGCL-202ENST00000374487 AOC1P19801 751 aa12.2□□□□□ -0.46
HMGCL-202ENST00000374487 NCF2P19878 526 aaPredicted RBP12.2□□□□□ -0.46
HMGCL-202ENST00000374487 CD86P42081 329 aa12.2□□□□□ -0.46
HMGCL-202ENST00000374487 POLD2P49005 469 aa12.2□□□□□ -0.46
HMGCL-202ENST00000374487 PGGT1BP53609 377 aa12.2□□□□□ -0.46
HMGCL-202ENST00000374487 RAB10P61026 200 aa12.2□□□□□ -0.46
HMGCL-202ENST00000374487 SLC10A7Q0GE19 358 aa12.2□□□□□ -0.46
HMGCL-202ENST00000374487 USP4Q13107 963 aa12.2□□□□□ -0.46
HMGCL-202ENST00000374487 POLD3Q15054 466 aaPredicted RBP12.2□□□□□ -0.46
HMGCL-202ENST00000374487 KHDC1Q4VXA5 237 aaKnown RBP12.2□□□□□ -0.46
HMGCL-202ENST00000374487 VWA5B1Q5TIE3 1220 aa12.2□□□□□ -0.46
HMGCL-202ENST00000374487 PLPP4Q5VZY2 271 aa12.2□□□□□ -0.46
HMGCL-202ENST00000374487 ATG14Q6ZNE5 492 aa12.2□□□□□ -0.46
HMGCL-202ENST00000374487 ZNF683Q8IZ20 524 aa12.2□□□□□ -0.46
HMGCL-202ENST00000374487 GPATCH11Q8N954 259 aa12.2□□□□□ -0.46
HMGCL-202ENST00000374487 OR6Y1Q8NGX8 325 aa12.2□□□□□ -0.46
HMGCL-202ENST00000374487 SPPL2BQ8TCT7 592 aa12.2□□□□□ -0.46
HMGCL-202ENST00000374487 KCNV2Q8TDN2 545 aa12.2□□□□□ -0.46
HMGCL-202ENST00000374487 STMN2Q93045 179 aa12.2□□□□□ -0.46
HMGCL-202ENST00000374487 PSMG2Q969U7 264 aa12.2□□□□□ -0.46
HMGCL-202ENST00000374487 IMP4Q96G21 291 aaKnown RBP12.2□□□□□ -0.46
HMGCL-202ENST00000374487 RSRC1Q96IZ7 334 aaKnown RBP12.2□□□□□ -0.46
HMGCL-202ENST00000374487 FAM167BQ9BTA0 163 aa12.2□□□□□ -0.46
HMGCL-202ENST00000374487 MRPL9Q9BYD2 267 aaKnown RBP12.2□□□□□ -0.46
HMGCL-202ENST00000374487 ILKAPQ9H0C8 392 aaPredicted RBP12.2□□□□□ -0.46
HMGCL-202ENST00000374487 SPG21Q9NZD8 308 aa12.2□□□□□ -0.46
HMGCL-202ENST00000374487 C5orf42Q9H799 3197 aa12.2□□□□□ -0.46
HMGCL-202ENST00000374487 FAM95CA0A1B0GW59 222 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 FAM92AA1XBS5 289 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 MTMR11A4FU01 709 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.19□□□□□ -0.46
HMGCL-202ENST00000374487 TK2O00142 265 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 RAMP2O60895 175 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 SIN3BO75182 1162 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 PEX11BO96011 259 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 SLC35E2BP0CK96 405 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 TPBGLP0DKB5 382 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 COL6A2P12110 1019 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 FGFR3P22607 806 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 ARNTP27540 789 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 CRABP2P29373 138 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 SLC1A2P43004 574 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 CD151P48509 253 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 SERPINH1P50454 418 aaKnown RBP12.19□□□□□ -0.46
HMGCL-202ENST00000374487 GPR17Q13304 367 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 TUBB3Q13509 450 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 KPNB1Q14974 876 aaKnown RBP12.19□□□□□ -0.46
HMGCL-202ENST00000374487 DNAL1Q4LDG9 190 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 KIAA0930Q6ICG6 404 aaPredicted RBP12.19□□□□□ -0.46
HMGCL-202ENST00000374487 NEPROQ6NW34 567 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 ZYG11AQ6WRX3 759 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 MAVSQ7Z434 540 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 ZNF781Q8N8C0 355 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 AGR3Q8TD06 166 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 KCTD4Q8WVF5 259 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 IGSF21Q96ID5 467 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 ELMO2Q96JJ3 720 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 CDH19Q9H159 772 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 COG4Q9H9E3 785 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 VPS45Q9NRW7 570 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 TREX1Q9NSU2 369 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 MCM8Q9UJA3 840 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 PATJQ8NI35 1801 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 IGLV3-10A0A075B6K4 115 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 ALOX15P16050 662 aaPredicted RBP12.19□□□□□ -0.46
HMGCL-202ENST00000374487 POU3F3P20264 500 aaPredicted RBP12.19□□□□□ -0.46
HMGCL-202ENST00000374487 OR1E1P30953 314 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 CA8P35219 290 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 ETFBP38117 255 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 DUSP4Q13115 394 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 LIPMQ5VYY2 423 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 FUT10Q6P4F1 479 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 KDELC1Q6UW63 502 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 RNF19BQ6ZMZ0 732 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 EP400NLQ6ZTU2 488 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 ENDOVQ8N8Q3 282 aaKnown RBP12.19□□□□□ -0.46
HMGCL-202ENST00000374487 TDRD5Q8NAT2 981 aaKnown RBP12.19□□□□□ -0.46
HMGCL-202ENST00000374487 FBXO27Q8NI29 283 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 CALML6Q8TD86 181 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 FATE1Q969F0 183 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 IGSF8Q969P0 613 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 THTPAQ9BU02 230 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 GATA5Q9BWX5 397 aaPredicted RBP12.19□□□□□ -0.46
HMGCL-202ENST00000374487 C1QTNF1Q9BXJ1 281 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 OXCT2Q9BYC2 517 aaPredicted RBP12.19□□□□□ -0.46
HMGCL-202ENST00000374487 ARNT2Q9HBZ2 717 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 FBXO5Q9UKT4 447 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 RWDD3Q9Y3V2 267 aa12.19□□□□□ -0.46
HMGCL-202ENST00000374487 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.19□□□□□ -0.46
HMGCL-202ENST00000374487 H7C4K7 107 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 MAGEC1O60732 1142 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 CIB2O75838 187 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 GRIA4P48058 902 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 PRKAA2P54646 552 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 DSC2Q02487 901 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 DLX2Q07687 328 aaPredicted RBP12.18□□□□□ -0.46
HMGCL-202ENST00000374487 HYAL1Q12794 435 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 SMARCB1Q12824 385 aa12.18□□□□□ -0.46
HMGCL-202ENST00000374487 ELAVL2Q12926 359 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms