RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 SKA2Q8WVK7 121 aaPredicted RBP10.32□□□□□ -0.76
CD28-202ENST00000374481 C8orf48Q96LL4 319 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 ORAI2Q96SN7 254 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 CHCHD6Q9BRQ6 235 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 TTYH1Q9H313 450 aaPredicted RBP10.32□□□□□ -0.76
CD28-202ENST00000374481 ZNF304Q9HCX3 659 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 PCDHA11Q9Y5I1 949 aa10.32□□□□□ -0.76
CD28-202ENST00000374481 TECPR2O15040 1411 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 DLG5Q8TDM6 1919 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 MSH4O15457 936 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 PSIP1O75475 530 aaKnown RBP10.31□□□□□ -0.76
CD28-202ENST00000374481 TADA2AO75478 443 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 CD36P16671 472 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 POU1F1P28069 291 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 IDH2P48735 452 aaKnown RBP10.31□□□□□ -0.76
CD28-202ENST00000374481 CDKL1Q00532 357 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 PCSK7Q16549 785 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 PIWIL4Q7Z3Z4 852 aaKnown RBP10.31□□□□□ -0.76
CD28-202ENST00000374481 RELL1Q8IUW5 271 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 COLGALT1Q8NBJ5 622 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 ZNF606Q8WXB4 792 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 FAM120BQ96EK7 910 aaKnown RBP10.31□□□□□ -0.76
CD28-202ENST00000374481 CDCA7Q9BWT1 371 aaPredicted RBP10.31□□□□□ -0.76
CD28-202ENST00000374481 TDRD1Q9BXT4 1180 aaKnown RBP10.31□□□□□ -0.76
CD28-202ENST00000374481 ZNF518BQ9C0D4 1074 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 MTMR4Q9NYA4 1195 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 AJAP1Q9UKB5 411 aaPredicted RBP10.31□□□□□ -0.76
CD28-202ENST00000374481 SCAF8Q9UPN6 1271 aaKnown RBP10.31□□□□□ -0.76
CD28-202ENST00000374481 SUPT3HB4E1H0 165 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 ERCC2P18074 760 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 AKT1P31749 480 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 SUSD4Q5VX71 490 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 BTN2A1Q7KYR7 527 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 FAM20CQ8IXL6 584 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 MAELQ96JY0 434 aaKnown RBP10.31□□□□□ -0.76
CD28-202ENST00000374481 APOL2Q9BQE5 337 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 SLC35C2Q9NQQ7 365 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 ACSS2Q9NR19 701 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 ANKRD6Q9Y2G4 727 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 CD3EAPO15446 510 aaKnown RBP10.31□□□□□ -0.76
CD28-202ENST00000374481 AP1G1O43747 822 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 CABYRO75952 493 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 FAM163BP0C2L3 166 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 SMIM18P0DKX4 95 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 IL7P13232 177 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 CYP4B1P13584 511 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 AP3M2P53677 418 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 RPL7AP62424 266 aaKnown RBP10.31□□□□□ -0.76
CD28-202ENST00000374481 SIM2Q14190 667 aaPredicted RBP10.31□□□□□ -0.76
CD28-202ENST00000374481 FXNQ16595 210 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 BTBD16Q32M84 506 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 ARL13AQ5H913 290 aaPredicted RBP10.31□□□□□ -0.76
CD28-202ENST00000374481 TMEM198Q66K66 360 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 ERMP1Q7Z2K6 904 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 SLC22A9Q8IVM8 553 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 FAM109AQ8N4B1 249 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 OR5H6Q8NGV6 325 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 WDR36Q8NI36 951 aaKnown RBP10.31□□□□□ -0.76
CD28-202ENST00000374481 VANGL1Q8TAA9 524 aaPredicted RBP10.31□□□□□ -0.76
CD28-202ENST00000374481 TMC2Q8TDI7 906 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 PDCD10Q9BUL8 212 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 SLA2Q9H6Q3 261 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 ACTR3BQ9P1U1 418 aa10.31□□□□□ -0.76
CD28-202ENST00000374481 CNOT11Q9UKZ1 510 aaKnown RBP10.31□□□□□ -0.76
CD28-202ENST00000374481 FAM86B1E9PN63 330 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 SORBS2O94875 1100 aaKnown RBP10.3□□□□□ -0.76
CD28-202ENST00000374481 DHFRP00374 187 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 IFNA7P01567 189 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 CNPP09543 421 aaKnown RBP10.3□□□□□ -0.76
CD28-202ENST00000374481 CCNYL3P0C7X3 344 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 NAT2P11245 290 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 FMO4P31512 558 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 UQCRC1P31930 480 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 CRKP46108 304 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 PPP5CP53041 499 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 VBP1P61758 197 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 AGAP7PQ5VUJ5 663 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 TMEM236Q5W0B7 351 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 ANKRD26P1Q6NSI1 321 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 LINC00523Q86TU6 105 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 TRIM48Q8IWZ4 208 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 COLGALT2Q8IYK4 626 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 ANKRD52Q8NB46 1076 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 DCAF4Q8WV16 495 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 CENPIQ92674 756 aaPredicted RBP10.3□□□□□ -0.76
CD28-202ENST00000374481 SH3YL1Q96HL8 342 aaPredicted RBP10.3□□□□□ -0.76
CD28-202ENST00000374481 FAM84BQ96KN1 310 aaPredicted RBP10.3□□□□□ -0.76
CD28-202ENST00000374481 OR52B2Q96RD2 323 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 BEX2Q9BXY8 128 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 RPF1Q9H9Y2 349 aaKnown RBP10.3□□□□□ -0.76
CD28-202ENST00000374481 SIX2Q9NPC8 291 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 FARSBQ9NSD9 589 aaKnown RBP10.3□□□□□ -0.76
CD28-202ENST00000374481 GABBR1Q9UBS5 961 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 SUCOQ9UBS9 1254 aaKnown RBP10.3□□□□□ -0.76
CD28-202ENST00000374481 BCKDKO14874 412 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 OR2B3O76000 313 aa10.3□□□□□ -0.76
CD28-202ENST00000374481 LSM8O95777 96 aaKnown RBP10.3□□□□□ -0.76
CD28-202ENST00000374481 HNRNPLP14866 589 aaKnown RBP eCLIP10.3□□□□□ -0.76
CD28-202ENST00000374481 GTF2E2P29084 291 aaKnown RBP10.3□□□□□ -0.76
CD28-202ENST00000374481 CASP7P55210 303 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms