RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 KCTD13Q8WZ19 329 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 ATP6V1E2Q96A05 226 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 SUSD3Q96L08 255 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 LENG8Q96PV6 779 aaPredicted RBP10.89□□□□□ -0.67
CXCL12-203ENST00000374429 C11orf84Q9BUA3 381 aaPredicted RBP10.89□□□□□ -0.67
CXCL12-203ENST00000374429 ZYG11BQ9C0D3 744 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 CERS4Q9HA82 394 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 FBRSL1Q9HCM7 1045 aaKnown RBP10.89□□□□□ -0.67
CXCL12-203ENST00000374429 SEMA4BQ9NPR2 832 aaPredicted RBP10.89□□□□□ -0.67
CXCL12-203ENST00000374429 ZDHHC2Q9UIJ5 367 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 FCF1Q9Y324 198 aaKnown RBP10.89□□□□□ -0.67
CXCL12-203ENST00000374429 TIMM22Q9Y584 194 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 OTOFQ9HC10 1997 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 CCDC160A6NGH7 325 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 ENPP3O14638 875 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 SIN3BO75182 1162 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 FGF3P11487 239 aaPredicted RBP10.89□□□□□ -0.67
CXCL12-203ENST00000374429 FGFR3P22607 806 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 PAFAH1B3Q15102 231 aaKnown RBP10.89□□□□□ -0.67
CXCL12-203ENST00000374429 NFE2Q16621 373 aaPredicted RBP10.89□□□□□ -0.67
CXCL12-203ENST00000374429 PPP1R3AQ16821 1122 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 GALNTL6Q49A17 601 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 LPCAT4Q643R3 524 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 SCUBE1Q8IWY4 988 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 OR9I1Q8NGQ6 314 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 CDC26Q8NHZ8 85 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 TMEM169Q96HH4 297 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 ILKAPQ9H0C8 392 aaPredicted RBP10.89□□□□□ -0.67
CXCL12-203ENST00000374429 TLR8Q9NR97 1041 aaKnown RBP10.89□□□□□ -0.67
CXCL12-203ENST00000374429 GALNT8Q9NY28 637 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 UBAP1Q9NZ09 502 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 PCDHB9Q9Y5E1 797 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 LUC7L3O95232 432 aaKnown RBP10.89□□□□□ -0.67
CXCL12-203ENST00000374429 TFEBP19484 476 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 KCNA5P22460 613 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 HOXD10P28358 340 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 MLLT6P55198 1093 aaPredicted RBP10.89□□□□□ -0.67
CXCL12-203ENST00000374429 CYP4F8P98187 520 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 TLE2Q04725 743 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 FUT11Q495W5 492 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 SPANXN3Q5MJ09 141 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 SNX30Q5VWJ9 437 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 RBM23Q86U06 439 aaKnown RBP10.89□□□□□ -0.67
CXCL12-203ENST00000374429 SPATA24Q86W54 205 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 PPFIBP2Q8ND30 876 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 FBXO22Q8NEZ5 403 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 OR4K2Q8NGD2 314 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 LRRC39Q96DD0 335 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 TCF7L2Q9NQB0 619 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 RGS18Q9NS28 235 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 HACD3Q9P035 362 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 SSX2IPQ9Y2D8 614 aa10.89□□□□□ -0.67
CXCL12-203ENST00000374429 NUP214P35658 2090 aaPredicted RBP10.89□□□□□ -0.67
CXCL12-203ENST00000374429 SMAPO00193 183 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 SBF1O95248 1867 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 LINGO3P0C6S8 592 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 IDH3AP50213 366 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 SERPINH1P50454 418 aaKnown RBP10.88□□□□□ -0.67
CXCL12-203ENST00000374429 RENBPP51606 427 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 NOGQ13253 232 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 PDAP1Q13442 181 aaKnown RBP10.88□□□□□ -0.67
CXCL12-203ENST00000374429 GRTP1Q5TC63 336 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 PKN3Q6P5Z2 889 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 ARHGAP12Q8IWW6 846 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 ZNF276Q8N554 614 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 WBP2Q969T9 261 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 PPWD1Q96BP3 646 aaKnown RBP10.88□□□□□ -0.67
CXCL12-203ENST00000374429 SLC22A12Q96S37 553 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 PIDD1Q9HB75 910 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 SPATA7Q9P0W8 599 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 FAM155AB1AL88 458 aaPredicted RBP10.88□□□□□ -0.67
CXCL12-203ENST00000374429 SUPT3HB4E1H0 165 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 MUSKO15146 869 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 SUPT3HO75486 399 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 RHOBTB1O94844 696 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 ALPIP09923 528 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 MYL4P12829 197 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 ZNF24P17028 368 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 SGSHP51688 502 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 COPAP53621 1224 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 LIMK2P53671 638 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 SMAD3P84022 425 aaKnown RBP10.88□□□□□ -0.67
CXCL12-203ENST00000374429 GALNT2Q10471 571 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 HSF5Q4G112 596 aaPredicted RBP10.88□□□□□ -0.67
CXCL12-203ENST00000374429 CCDC92Q53HC0 331 aaPredicted RBP10.88□□□□□ -0.67
CXCL12-203ENST00000374429 PCID2Q5JVF3 399 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 RNF219Q5W0B1 726 aaPredicted RBP10.88□□□□□ -0.67
CXCL12-203ENST00000374429 ATP6V0D2Q8N8Y2 350 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 PIP4K2CQ8TBX8 421 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 KCNA7Q96RP8 456 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 CDRT15Q96T59 188 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 DHRS4Q9BTZ2 278 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 CINPQ9BW66 212 aaPredicted RBP10.88□□□□□ -0.67
CXCL12-203ENST00000374429 SEMA6AQ9H2E6 1030 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.88□□□□□ -0.67
CXCL12-203ENST00000374429 NCKIPSDQ9NZQ3 722 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 PEX1O43933 1283 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 TRIM16O95361 564 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 PAMP19021 973 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 CALB2P22676 271 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms