RNA–Protein interactions for RNA: ENST00000373544.5

RABEPK-203, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-203ENST00000373544 MTA1Q13330 715 aa12.2□□□□□ -0.46
RABEPK-203ENST00000373544 USP10Q14694 798 aaKnown RBP12.2□□□□□ -0.46
RABEPK-203ENST00000373544 SLC5A9Q2M3M2 681 aa12.2□□□□□ -0.46
RABEPK-203ENST00000373544 FASTKD1Q53R41 847 aaKnown RBP12.2□□□□□ -0.46
RABEPK-203ENST00000373544 RBM20Q5T481 1227 aaKnown RBP12.2□□□□□ -0.46
RABEPK-203ENST00000373544 NEPROQ6NW34 567 aa12.2□□□□□ -0.46
RABEPK-203ENST00000373544 CCDC149Q6ZUS6 474 aa12.2□□□□□ -0.46
RABEPK-203ENST00000373544 SPATS2Q86XZ4 545 aaKnown RBP12.2□□□□□ -0.46
RABEPK-203ENST00000373544 CEP97Q8IW35 865 aa12.2□□□□□ -0.46
RABEPK-203ENST00000373544 MFN1Q8IWA4 741 aa12.2□□□□□ -0.46
RABEPK-203ENST00000373544 TDRD5Q8NAT2 981 aaKnown RBP12.2□□□□□ -0.46
RABEPK-203ENST00000373544 RMDN1Q96DB5 314 aa12.2□□□□□ -0.46
RABEPK-203ENST00000373544 DNAJC1Q96KC8 554 aaKnown RBP12.2□□□□□ -0.46
RABEPK-203ENST00000373544 TBATAQ96M53 351 aa12.2□□□□□ -0.46
RABEPK-203ENST00000373544 PPP1R2P1Q96PQ5 205 aa12.2□□□□□ -0.46
RABEPK-203ENST00000373544 EMILIN2Q9BXX0 1053 aa12.2□□□□□ -0.46
RABEPK-203ENST00000373544 MAN1C1Q9NR34 630 aa12.2□□□□□ -0.46
RABEPK-203ENST00000373544 TLR9Q9NR96 1032 aa12.2□□□□□ -0.46
RABEPK-203ENST00000373544 MARCH4Q9P2E8 410 aaPredicted RBP12.2□□□□□ -0.46
RABEPK-203ENST00000373544 KLHL14Q9P2G3 628 aa12.2□□□□□ -0.46
RABEPK-203ENST00000373544 SPO11Q9Y5K1 396 aa12.2□□□□□ -0.46
RABEPK-203ENST00000373544 NOTCH4Q99466 2003 aa12.2□□□□□ -0.46
RABEPK-203ENST00000373544 LEFTY2O00292 366 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 PLIN3O60664 434 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 BPGMP07738 259 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 GKP32189 559 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 SLC8A1P32418 973 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 CREMQ03060 361 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 TEAD2Q15562 447 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 GPR158Q5T848 1215 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 PSRC1Q6PGN9 363 aaPredicted RBP12.19□□□□□ -0.46
RABEPK-203ENST00000373544 ELMOD1Q8N336 334 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 HJURPQ8NCD3 748 aaPredicted RBP12.19□□□□□ -0.46
RABEPK-203ENST00000373544 SHKBP1Q8TBC3 707 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 E2F7Q96AV8 911 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 SCUBE2Q9NQ36 999 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 MKS1Q9NXB0 559 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.19□□□□□ -0.46
RABEPK-203ENST00000373544 VPS51Q9UID3 782 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 GGA2Q9UJY4 613 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 STOML2Q9UJZ1 356 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 FBXO5Q9UKT4 447 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 ASB3Q9Y575 518 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 NUMBLQ9Y6R0 609 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 TRAV19A0A0A6YYK7 116 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 INSIG1O15503 277 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 SMAD6O43541 496 aaKnown RBP12.19□□□□□ -0.46
RABEPK-203ENST00000373544 GLRA3O75311 464 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 ALDH3A1P30838 453 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 TNK2Q07912 1038 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 FRG1Q14331 258 aaKnown RBP12.19□□□□□ -0.46
RABEPK-203ENST00000373544 CBX2Q14781 532 aaPredicted RBP12.19□□□□□ -0.46
RABEPK-203ENST00000373544 PCLAFQ15004 111 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 C9orf50Q5SZB4 431 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 KIAA0930Q6ICG6 404 aaPredicted RBP12.19□□□□□ -0.46
RABEPK-203ENST00000373544 ATG14Q6ZNE5 492 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 C10orf107Q8IVU9 208 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 CMTM8Q8IZV2 173 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 BBS5Q8N3I7 341 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 LPCAT1Q8NF37 534 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 SP7Q8TDD2 431 aaPredicted RBP12.19□□□□□ -0.46
RABEPK-203ENST00000373544 SH3RF2Q8TEC5 729 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 ING5Q8WYH8 240 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 FAM136AQ96C01 138 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 RPL10LQ96L21 214 aaKnown RBP12.19□□□□□ -0.46
RABEPK-203ENST00000373544 ZNF599Q96NL3 588 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 DDX50Q9BQ39 737 aaKnown RBP12.19□□□□□ -0.46
RABEPK-203ENST00000373544 RHOJQ9H4E5 214 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 DNMT3BQ9UBC3 853 aaKnown RBP12.19□□□□□ -0.46
RABEPK-203ENST00000373544 LSM7Q9UK45 103 aaKnown RBP12.19□□□□□ -0.46
RABEPK-203ENST00000373544 SSX2IPQ9Y2D8 614 aa12.19□□□□□ -0.46
RABEPK-203ENST00000373544 FAM95CA0A1B0GW59 222 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 TIMM44O43615 452 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 ITM2AO43736 263 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 ZMPSTE24O75844 475 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 PRLP01236 227 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 PROCP04070 461 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 PAMP19021 973 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 CR2P20023 1033 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 CD70P32970 193 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 CSE1LP55060 971 aaKnown RBP12.18□□□□□ -0.46
RABEPK-203ENST00000373544 ZNF449Q6P9G9 518 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 EFHBQ8N7U6 833 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 PPP1R14CQ8TAE6 165 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 ACMSDQ8TDX5 336 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 KCTD4Q8WVF5 259 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 C10orf82Q8WW14 230 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 MYLIPQ8WY64 445 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 ELMO2Q96JJ3 720 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 FEM1CQ96JP0 617 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 GCNAQ96QF7 691 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 TRIB3Q96RU7 358 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 GPR22Q99680 433 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 SIRPGQ9P1W8 387 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 SPTBN5Q9NRC6 3674 aaKnown RBP12.18□□□□□ -0.46
RABEPK-203ENST00000373544 TYW5A2RUC4 315 aaKnown RBP12.18□□□□□ -0.46
RABEPK-203ENST00000373544 MROH6A6NGR9 719 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 CA3P07451 260 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 MAGEA12P43365 314 aa12.18□□□□□ -0.46
RABEPK-203ENST00000373544 PRAMEP78395 509 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms