RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 CHD5Q8TDI0 1954 aa17.5■□□□□ 0.39
UBE3D-203ENST00000369747 PENKP01210 267 aaPredicted RBP17.49■□□□□ 0.39
UBE3D-203ENST00000369747 ERVK-10P10266 1014 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 TYRP14679 529 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 SERPINB4P48594 390 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 HTR4Q13639 388 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 CERCAMQ5T4B2 595 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 ZNF449Q6P9G9 518 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 RASSF3Q86WH2 238 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 OR7D4Q8NG98 312 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 APOL2Q9BQE5 337 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 THG1LQ9NWX6 298 aaKnown RBP17.49■□□□□ 0.39
UBE3D-203ENST00000369747 KIF26AQ9ULI4 1882 aaPredicted RBP17.49■□□□□ 0.39
UBE3D-203ENST00000369747 ZCWPW2A0A1B0GU75 182 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 MATN3O15232 486 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 ECI2O75521 394 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 DNAJC8O75937 253 aaPredicted RBP17.49■□□□□ 0.39
UBE3D-203ENST00000369747 USP1O94782 785 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 RHOCP08134 193 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 MZF1P28698 734 aaPredicted RBP17.49■□□□□ 0.39
UBE3D-203ENST00000369747 NPY2RP49146 381 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 GNA12Q03113 381 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 PRPSAP1Q14558 356 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 SMAD2Q15796 467 aaKnown RBP17.49■□□□□ 0.39
UBE3D-203ENST00000369747 SMAD1Q15797 465 aaKnown RBP17.49■□□□□ 0.39
UBE3D-203ENST00000369747 SETD3Q86TU7 594 aaPredicted RBP17.49■□□□□ 0.39
UBE3D-203ENST00000369747 NDUFAF2Q8N183 169 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 KIAA1958Q8N8K9 716 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 NAT16Q8N8M0 369 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 C10orf82Q8WW14 230 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 ZNF669Q96BR6 464 aaPredicted RBP17.49■□□□□ 0.39
UBE3D-203ENST00000369747 RETREG1Q9H6L5 497 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 HPS4Q9NQG7 708 aa17.49■□□□□ 0.39
UBE3D-203ENST00000369747 MIA3Q5JRA6 1907 aa17.48■□□□□ 0.39
UBE3D-203ENST00000369747 ILVBLA1L0T0 632 aa17.48■□□□□ 0.39
UBE3D-203ENST00000369747 ANHXE9PGG2 379 aa17.48■□□□□ 0.39
UBE3D-203ENST00000369747 H0YHG0 523 aa17.48■□□□□ 0.39
UBE3D-203ENST00000369747 TRIM24O15164 1050 aa17.48■□□□□ 0.39
UBE3D-203ENST00000369747 ALDOAP04075 364 aaKnown RBP17.48■□□□□ 0.39
UBE3D-203ENST00000369747 BGNP21810 368 aa17.48■□□□□ 0.39
UBE3D-203ENST00000369747 CRHR1P34998 444 aa17.48■□□□□ 0.39
UBE3D-203ENST00000369747 FRG1Q14331 258 aaKnown RBP17.48■□□□□ 0.39
UBE3D-203ENST00000369747 LEXMQ3ZCV2 418 aa17.48■□□□□ 0.39
UBE3D-203ENST00000369747 PARP15Q460N3 678 aa17.48■□□□□ 0.39
UBE3D-203ENST00000369747 RNF219Q5W0B1 726 aaPredicted RBP17.48■□□□□ 0.39
UBE3D-203ENST00000369747 ASTLQ6HA08 431 aaPredicted RBP17.48■□□□□ 0.39
UBE3D-203ENST00000369747 ZNF354CQ86Y25 554 aa17.48■□□□□ 0.39
UBE3D-203ENST00000369747 CNPY4Q8N129 248 aa17.48■□□□□ 0.39
UBE3D-203ENST00000369747 GBP7Q8N8V2 638 aaPredicted RBP17.48■□□□□ 0.39
UBE3D-203ENST00000369747 TTC8Q8TAM2 541 aa17.48■□□□□ 0.39
UBE3D-203ENST00000369747 PHF7Q9BWX1 381 aaPredicted RBP17.48■□□□□ 0.39
UBE3D-203ENST00000369747 MUC3BQ9H195 1237 aa17.48■□□□□ 0.39
UBE3D-203ENST00000369747 GTSE1Q9NYZ3 720 aa17.48■□□□□ 0.39
UBE3D-203ENST00000369747 ZFATQ9P243 1243 aa17.48■□□□□ 0.39
UBE3D-203ENST00000369747 J3KR12 359 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 PSMD3O43242 534 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 ATP9BO43861 1147 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 GLDCP23378 1020 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 HLA-FP30511 346 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 GDI1P31150 447 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 CD70P32970 193 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 YBEYP58557 167 aaPredicted RBP17.47■□□□□ 0.39
UBE3D-203ENST00000369747 SERINC3Q13530 473 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 ANKRD20A4Q4UJ75 823 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 FBXW10Q5XX13 1052 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 NAPEPLDQ6IQ20 393 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 PTCRAQ6ISU1 281 aaPredicted RBP17.47■□□□□ 0.39
UBE3D-203ENST00000369747 MTSS1LQ765P7 747 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 PACS2Q86VP3 889 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 YAF2Q8IY57 180 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.47■□□□□ 0.39
UBE3D-203ENST00000369747 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.47■□□□□ 0.39
UBE3D-203ENST00000369747 SPATA22Q8NHS9 363 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 MAFAQ8NHW3 353 aaPredicted RBP17.47■□□□□ 0.39
UBE3D-203ENST00000369747 FIBINQ8TAL6 211 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 ATP2A3Q93084 1043 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 FCRL5Q96RD9 977 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 FEM1AQ9BSK4 669 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 SPON2Q9BUD6 331 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 IL22Q9GZX6 179 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 MAGEH1Q9H213 219 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 GLOD4Q9HC38 313 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 MARK1Q9P0L2 795 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 LIMD1Q9UGP4 676 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 IPO11Q9UI26 975 aaKnown RBP17.47■□□□□ 0.39
UBE3D-203ENST00000369747 USH1CQ9Y6N9 552 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 A0A0C4DFX4 3053 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 MUC3AQ02505 3323 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 BPTFQ12830 3046 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 FAM237BA0A1B0GVD1 139 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 TOP3BO95985 862 aaKnown RBP17.47■□□□□ 0.39
UBE3D-203ENST00000369747 ITGA2BP08514 1039 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 ADH5P11766 374 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 TPH1P17752 444 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 CSKP41240 450 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 CCDC15Q0P6D6 951 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 CDH17Q12864 832 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 BNIP1Q12981 228 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 IL31Q6EBC2 164 aa17.47■□□□□ 0.39
UBE3D-203ENST00000369747 ARMC2Q8NEN0 867 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms