RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 ANKRD13AQ8IZ07 590 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 OFCC1Q8IZS5 231 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 CBR4Q8N4T8 237 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 RNF19AQ9NV58 838 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 MAGEL2Q9UJ55 1249 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 MATN2O00339 956 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 PIK3CGP48736 1102 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 PSEN1P49768 467 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 CDH13P55290 713 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 PSMD5Q16401 504 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 ST13P5Q8NFI4 369 aaPredicted RBP16.02■□□□□ 0.16
COL17A1-202ENST00000369733 OLFM1Q99784 485 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 SDCBP2Q9H190 292 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.02■□□□□ 0.16
COL17A1-202ENST00000369733 TRPC4Q9UBN4 977 aa16.02■□□□□ 0.16
COL17A1-202ENST00000369733 EIF2S1P05198 315 aaKnown RBP16.02■□□□□ 0.15
COL17A1-202ENST00000369733 KPNA1P52294 538 aaPredicted RBP16.02■□□□□ 0.15
COL17A1-202ENST00000369733 TRAP1Q12931 704 aaKnown RBP16.02■□□□□ 0.15
COL17A1-202ENST00000369733 LSM12Q3MHD2 195 aaKnown RBP16.02■□□□□ 0.15
COL17A1-202ENST00000369733 PAGE2BQ5JRK9 111 aa16.02■□□□□ 0.15
COL17A1-202ENST00000369733 GPRIN3Q6ZVF9 776 aa16.02■□□□□ 0.15
COL17A1-202ENST00000369733 EBF4Q9BQW3 602 aa16.02■□□□□ 0.15
COL17A1-202ENST00000369733 ATP13A1Q9HD20 1204 aa16.02■□□□□ 0.15
COL17A1-202ENST00000369733 TLR8Q9NR97 1041 aaKnown RBP16.02■□□□□ 0.15
COL17A1-202ENST00000369733 NFASCO94856 1347 aa16.02■□□□□ 0.15
COL17A1-202ENST00000369733 FAM149AA5PLN7 773 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 SLC22A3O75751 556 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 DPEP1P16444 411 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 GDF10P55107 478 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 PRKD1Q15139 912 aaPredicted RBP16.01■□□□□ 0.15
COL17A1-202ENST00000369733 ARL13AQ5H913 290 aaPredicted RBP16.01■□□□□ 0.15
COL17A1-202ENST00000369733 REP15Q6BDI9 236 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 ZNF410Q86VK4 478 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 FAM126AQ9BYI3 521 aaPredicted RBP16.01■□□□□ 0.15
COL17A1-202ENST00000369733 CCNB1IP1Q9NPC3 277 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 TRMT13Q9NUP7 481 aaKnown RBP16.01■□□□□ 0.15
COL17A1-202ENST00000369733 ZNF624Q9P2J8 865 aaPredicted RBP16.01■□□□□ 0.15
COL17A1-202ENST00000369733 ABT1Q9ULW3 272 aaKnown RBP16.01■□□□□ 0.15
COL17A1-202ENST00000369733 RBMX2Q9Y388 322 aaKnown RBP16.01■□□□□ 0.15
COL17A1-202ENST00000369733 FEN1P39748 380 aaKnown RBP16.01■□□□□ 0.15
COL17A1-202ENST00000369733 CYP4F2P78329 520 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 CYP4F3Q08477 520 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 NDUFA5Q16718 116 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 PPP1R26Q5T8A7 1209 aaPredicted RBP16.01■□□□□ 0.15
COL17A1-202ENST00000369733 MCFD2Q8NI22 146 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 HTRA1Q92743 480 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 PPP3R2Q96LZ3 170 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 UNC93B1Q9H1C4 597 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 PNPLA8Q9NP80 782 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 SMPD3Q9NY59 655 aaPredicted RBP16.01■□□□□ 0.15
COL17A1-202ENST00000369733 DISP2A7MBM2 1401 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 CCDC189A1A4V9 331 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 YDJCA8MPS7 323 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 ATP6V1G1O75348 118 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 RPL38P63173 70 aaKnown RBP16.01■□□□□ 0.15
COL17A1-202ENST00000369733 TIGD2Q4W5G0 525 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 ZYG11AQ6WRX3 759 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 PDPRQ8NCN5 879 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 SLCO2A1Q92959 643 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 TRMOQ9BU70 441 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 RHOBTB2Q9BYZ6 727 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 RECQL4O94761 1208 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 MBL2P11226 248 aaPredicted RBP16.01■□□□□ 0.15
COL17A1-202ENST00000369733 PABPC1P11940 636 aaKnown RBP16.01■□□□□ 0.15
COL17A1-202ENST00000369733 CYP4B1P13584 511 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 MATKP42679 507 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 SLC5A3P53794 718 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 TRIM74Q86UV6 250 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 TRIM73Q86UV7 250 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 FBXO44Q9H4M3 255 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 PIDD1Q9HB75 910 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 BDNFP23560 247 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 PPP2R1BP30154 601 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 CYP2C18P33260 490 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 THAP5Q7Z6K1 395 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 DNAJB3Q8WWF6 145 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 CSPG4P5Q96PW8 444 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 ZFP14Q9HCL3 533 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 DMAC2Q9NW81 257 aa16.01■□□□□ 0.15
COL17A1-202ENST00000369733 IL6P05231 212 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 S100A1P23297 94 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 GBE1Q04446 702 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 NFE2Q16621 373 aaPredicted RBP16■□□□□ 0.15
COL17A1-202ENST00000369733 LRRC42Q9Y546 428 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 PCDHB12Q9Y5F1 795 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 CCT3P49368 545 aaKnown RBP16■□□□□ 0.15
COL17A1-202ENST00000369733 KLHL12Q53G59 568 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 CERS5Q8N5B7 392 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 SELENOMQ8WWX9 145 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 STARD8Q92502 1023 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 ELOVL4Q9GZR5 314 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 CCL15-CCL14A0A0B4J2E2 113 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 COL6A2P12110 1019 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 HPCAL1P37235 193 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 ALDH9A1P49189 494 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 CCL15Q16663 113 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 ZSWIM7Q19AV6 140 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 CACTIN-AS1Q8N1I8 211 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 SLC4A11Q8NBS3 891 aa16■□□□□ 0.15
COL17A1-202ENST00000369733 COLEC11Q9BWP8 271 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms