RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 SEPT3Q9UH03 358 aa19.13■□□□□ 0.65
CKS1B-203ENST00000368439 INTUQ9ULD6 942 aa19.13■□□□□ 0.65
CKS1B-203ENST00000368439 AKAP13Q12802 2813 aa19.13■□□□□ 0.65
CKS1B-203ENST00000368439 FRYQ5TBA9 3013 aa19.13■□□□□ 0.65
CKS1B-203ENST00000368439 PLXNB3Q9ULL4 1909 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 TTC24A2A3L6 582 aaPredicted RBP19.12■□□□□ 0.65
CKS1B-203ENST00000368439 A6NNZ2 444 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 TMEM110-MUSTN1A8MSY1 372 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 MFSD11O43934 449 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 MMP20O60882 483 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 TRIM16O95361 564 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 LCA5LO95447 670 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 KRT7P08729 469 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 ATXN1LP0C7T5 689 aaKnown RBP19.12■□□□□ 0.65
CKS1B-203ENST00000368439 ARHGAP25P42331 645 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 SGCGQ13326 291 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 BRAT1Q6PJG6 821 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 KDM7AQ6ZMT4 941 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 Q6ZSR6 202 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 PQLC3Q8N755 202 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 PNPLA1Q8N8W4 532 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 KCTD6Q8NC69 237 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 DENND6BQ8NEG7 585 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 ADAMTS14Q8WXS8 1223 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 RFFLQ8WZ73 363 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 RAPGEF5Q92565 580 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 MRFAP1L1Q96HT8 127 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 TMEM121BQ9BXQ6 578 aaPredicted RBP19.12■□□□□ 0.65
CKS1B-203ENST00000368439 CALN1Q9BXU9 219 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 ATP13A3Q9H7F0 1226 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 PCDH12Q9NPG4 1184 aa19.12■□□□□ 0.65
CKS1B-203ENST00000368439 ASPMQ8IZT6 3477 aa19.11■□□□□ 0.65
CKS1B-203ENST00000368439 FAM221BA6H8Z2 402 aa19.11■□□□□ 0.65
CKS1B-203ENST00000368439 RIOK3O14730 519 aaKnown RBP19.11■□□□□ 0.65
CKS1B-203ENST00000368439 ITGAVP06756 1048 aa19.11■□□□□ 0.65
CKS1B-203ENST00000368439 KDELR1P24390 212 aa19.11■□□□□ 0.65
CKS1B-203ENST00000368439 SERPINA4P29622 427 aa19.11■□□□□ 0.65
CKS1B-203ENST00000368439 SCNN1BP51168 640 aa19.11■□□□□ 0.65
CKS1B-203ENST00000368439 RENBPP51606 427 aa19.11■□□□□ 0.65
CKS1B-203ENST00000368439 PFN3P60673 137 aa19.11■□□□□ 0.65
CKS1B-203ENST00000368439 AP1S1P61966 158 aa19.11■□□□□ 0.65
CKS1B-203ENST00000368439 ELP6Q0PNE2 266 aa19.11■□□□□ 0.65
CKS1B-203ENST00000368439 GALNT2Q10471 571 aa19.11■□□□□ 0.65
CKS1B-203ENST00000368439 TPRG1LQ5T0D9 272 aa19.11■□□□□ 0.65
CKS1B-203ENST00000368439 CHCHD4Q8N4Q1 142 aa19.11■□□□□ 0.65
CKS1B-203ENST00000368439 ATPAF2Q8N5M1 289 aa19.11■□□□□ 0.65
CKS1B-203ENST00000368439 TP53I13Q8NBR0 393 aaPredicted RBP19.11■□□□□ 0.65
CKS1B-203ENST00000368439 CXorf40AQ8TE69 158 aa19.11■□□□□ 0.65
CKS1B-203ENST00000368439 SPOCK2Q92563 424 aa19.11■□□□□ 0.65
CKS1B-203ENST00000368439 MGME1Q9BQP7 344 aa19.11■□□□□ 0.65
CKS1B-203ENST00000368439 WRAP53Q9BUR4 548 aaKnown RBP19.11■□□□□ 0.65
CKS1B-203ENST00000368439 MAP1BP46821 2468 aaKnown RBP19.11■□□□□ 0.65
CKS1B-203ENST00000368439 C3orf70A6NLC5 250 aaPredicted RBP19.1■□□□□ 0.65
CKS1B-203ENST00000368439 FPGTO14772 594 aa19.1■□□□□ 0.65
CKS1B-203ENST00000368439 TNFSF14O43557 240 aa19.1■□□□□ 0.65
CKS1B-203ENST00000368439 TM7SF2O76062 418 aa19.1■□□□□ 0.65
CKS1B-203ENST00000368439 PRKCGP05129 697 aa19.1■□□□□ 0.65
CKS1B-203ENST00000368439 IGFALSP35858 605 aa19.1■□□□□ 0.65
CKS1B-203ENST00000368439 HSPA9P38646 679 aaKnown RBP19.1■□□□□ 0.65
CKS1B-203ENST00000368439 MMP12P39900 470 aa19.1■□□□□ 0.65
CKS1B-203ENST00000368439 GARSP41250 739 aaKnown RBP19.1■□□□□ 0.65
CKS1B-203ENST00000368439 BCL2L1Q07817 233 aa19.1■□□□□ 0.65
CKS1B-203ENST00000368439 FZD2Q14332 565 aa19.1■□□□□ 0.65
CKS1B-203ENST00000368439 INAVAQ3KP66 663 aa19.1■□□□□ 0.65
CKS1B-203ENST00000368439 PTAR1Q7Z6K3 402 aaPredicted RBP19.1■□□□□ 0.65
CKS1B-203ENST00000368439 DCP2Q8IU60 420 aaKnown RBP19.1■□□□□ 0.65
CKS1B-203ENST00000368439 LRRC49Q8IUZ0 686 aa19.1■□□□□ 0.65
CKS1B-203ENST00000368439 SLC25A45Q8N413 288 aa19.1■□□□□ 0.65
CKS1B-203ENST00000368439 TEX26Q8N6G2 289 aa19.1■□□□□ 0.65
CKS1B-203ENST00000368439 NUDCD1Q96RS6 583 aa19.1■□□□□ 0.65
CKS1B-203ENST00000368439 MBNL1Q9NR56 388 aaKnown RBP19.1■□□□□ 0.65
CKS1B-203ENST00000368439 KLK13Q9UKR3 277 aa19.1■□□□□ 0.65
CKS1B-203ENST00000368439 APOBEC2Q9Y235 224 aaKnown RBP19.1■□□□□ 0.65
CKS1B-203ENST00000368439 ATP8A1Q9Y2Q0 1164 aa19.1■□□□□ 0.65
CKS1B-203ENST00000368439 SPTY2D1-AS1A0A0U1RR47 76 aa19.09■□□□□ 0.65
CKS1B-203ENST00000368439 HTRA2O43464 458 aaPredicted RBP19.09■□□□□ 0.65
CKS1B-203ENST00000368439 SDC3O75056 442 aa19.09■□□□□ 0.65
CKS1B-203ENST00000368439 FECHP22830 423 aa19.09■□□□□ 0.65
CKS1B-203ENST00000368439 XPAP23025 273 aaPredicted RBP19.09■□□□□ 0.65
CKS1B-203ENST00000368439 RABIFP47224 123 aa19.09■□□□□ 0.65
CKS1B-203ENST00000368439 SEMG2Q02383 582 aa19.09■□□□□ 0.65
CKS1B-203ENST00000368439 SLC10A2Q12908 348 aaPredicted RBP19.09■□□□□ 0.65
CKS1B-203ENST00000368439 RALGDSQ12967 914 aa19.09■□□□□ 0.65
CKS1B-203ENST00000368439 ZNF235Q14590 738 aa19.09■□□□□ 0.65
CKS1B-203ENST00000368439 MAP7D3Q8IWC1 876 aa19.09■□□□□ 0.65
CKS1B-203ENST00000368439 EID2Q8N6I1 236 aa19.09■□□□□ 0.65
CKS1B-203ENST00000368439 MAML1Q92585 1016 aa19.09■□□□□ 0.65
CKS1B-203ENST00000368439 IFT43Q96FT9 208 aa19.09■□□□□ 0.65
CKS1B-203ENST00000368439 RNF157Q96PX1 679 aa19.09■□□□□ 0.65
CKS1B-203ENST00000368439 NOD2Q9HC29 1040 aa19.09■□□□□ 0.65
CKS1B-203ENST00000368439 COQ6Q9Y2Z9 468 aa19.09■□□□□ 0.65
CKS1B-203ENST00000368439 NEUROG3Q9Y4Z2 214 aa19.09■□□□□ 0.65
CKS1B-203ENST00000368439 WDFY3Q8IZQ1 3526 aa19.09■□□□□ 0.65
CKS1B-203ENST00000368439 ZNF487B1APH4 448 aa19.08■□□□□ 0.64
CKS1B-203ENST00000368439 MAP3K6O95382 1288 aa19.08■□□□□ 0.64
CKS1B-203ENST00000368439 GIMD1P0DJR0 217 aa19.08■□□□□ 0.64
CKS1B-203ENST00000368439 C6P13671 934 aa19.08■□□□□ 0.64
CKS1B-203ENST00000368439 DGKAP23743 735 aa19.08■□□□□ 0.64
CKS1B-203ENST00000368439 MMP13P45452 471 aa19.08■□□□□ 0.64
CKS1B-203ENST00000368439 HADHBP55084 474 aaKnown RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms