RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 SHCBP1Q8NEM2 672 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 FBXL20Q96IG2 436 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 SLC25A23Q9BV35 468 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 DUSP16Q9BY84 665 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 RBM38Q9H0Z9 239 aaKnown RBP8.24□□□□□ -1.09
CD46-208ENST00000367042 ADNPQ9H2P0 1102 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 RNF39Q9H2S5 420 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 RCOR3Q9P2K3 495 aaPredicted RBP8.24□□□□□ -1.09
CD46-208ENST00000367042 WARS2Q9UGM6 360 aaKnown RBP8.24□□□□□ -1.09
CD46-208ENST00000367042 TSR3Q9UJK0 312 aaKnown RBP8.24□□□□□ -1.09
CD46-208ENST00000367042 FBXO5Q9UKT4 447 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 COMMD10Q9Y6G5 202 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 SHROOM3Q8TF72 1996 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 DCLK1O15075 740 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 SBK3P0C264 359 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 CES1P23141 567 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 RPS12P25398 132 aaKnown RBP8.24□□□□□ -1.09
CD46-208ENST00000367042 CDK9P50750 372 aaKnown RBP8.24□□□□□ -1.09
CD46-208ENST00000367042 MAXP61244 160 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 PRKCQQ04759 706 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 SULT2A1Q06520 285 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 DCAF4L1Q3SXM0 396 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 ANKDD1AQ495B1 522 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 PCID2Q5JVF3 399 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 NEPROQ6NW34 567 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 PKN3Q6P5Z2 889 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 FAM35AQ86V20 835 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 CHERPQ8IWX8 916 aaKnown RBP8.24□□□□□ -1.09
CD46-208ENST00000367042 SPPL2BQ8TCT7 592 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 KCNN1Q92952 543 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 C12orf43Q96C57 262 aaKnown RBP8.24□□□□□ -1.09
CD46-208ENST00000367042 LRCH3Q96II8 777 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 MRPL57Q9BQC6 102 aaKnown RBP8.24□□□□□ -1.09
CD46-208ENST00000367042 ING2Q9H160 280 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 RBM22Q9NW64 420 aaKnown RBP eCLIP8.24□□□□□ -1.092e-7■■■□□ 16.8
CD46-208ENST00000367042 TRHDEQ9UKU6 1024 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 BTRCQ9Y297 605 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 DNAH12Q6ZR08 3092 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 PHIPQ8WWQ0 1821 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 SMIM28A0A1B0GU29 152 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 A0A1W2PPW3 197 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 DHRS12A0PJE2 317 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 NCF1BA6NI72 391 aaPredicted RBP8.24□□□□□ -1.09
CD46-208ENST00000367042 NCF1CA8MVU1 366 aaPredicted RBP8.24□□□□□ -1.09
CD46-208ENST00000367042 ZNF487B1APH4 448 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 H3BNH8 94 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 NFKBIEO00221 500 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 MTSS1O43312 755 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 MTHFD1P11586 935 aaKnown RBP8.24□□□□□ -1.09
CD46-208ENST00000367042 GFAPP14136 432 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 NCF1P14598 390 aaPredicted RBP8.24□□□□□ -1.09
CD46-208ENST00000367042 NCK1P16333 377 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 NR4A1P22736 598 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 FASP25445 335 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 SLC7A1P30825 629 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 HADHAP40939 763 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 TRAF2Q12933 501 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 APOFQ13790 326 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 PAFAH1B3Q15102 231 aaKnown RBP8.24□□□□□ -1.09
CD46-208ENST00000367042 FIBCD1Q8N539 461 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 LRRC52Q8N7C0 313 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 GFM2Q969S9 779 aaKnown RBP8.24□□□□□ -1.09
CD46-208ENST00000367042 PABPC5Q96DU9 382 aaKnown RBP8.24□□□□□ -1.09
CD46-208ENST00000367042 SNX27Q96L92 541 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 TEKT5Q96M29 485 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 TCF12Q99081 682 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 NPY6RQ99463 290 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 RHOBTB2Q9BYZ6 727 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 CXorf21Q9HAI6 301 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 PRM3Q9NNZ6 103 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 OAZ3Q9UMX2 235 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 SLC8A2Q9UPR5 921 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 AAR2Q9Y312 384 aaKnown RBP8.24□□□□□ -1.09
CD46-208ENST00000367042 TRAF6Q9Y4K3 522 aa8.24□□□□□ -1.09
CD46-208ENST00000367042 A0A0J9YYE9 177 aa8.23□□□□□ -1.09
CD46-208ENST00000367042 ERI2A8K979 691 aaKnown RBP8.23□□□□□ -1.09
CD46-208ENST00000367042 NCAM2O15394 837 aa8.23□□□□□ -1.09
CD46-208ENST00000367042 IPO13O94829 963 aaKnown RBP8.23□□□□□ -1.09
CD46-208ENST00000367042 CD4P01730 458 aa8.23□□□□□ -1.09
CD46-208ENST00000367042 PRKAA2P54646 552 aa8.23□□□□□ -1.09
CD46-208ENST00000367042 SV2CQ496J9 727 aa8.23□□□□□ -1.09
CD46-208ENST00000367042 ZNF789Q5FWF6 425 aa8.23□□□□□ -1.09
CD46-208ENST00000367042 GPR158Q5T848 1215 aa8.23□□□□□ -1.09
CD46-208ENST00000367042 DUS1LQ6P1R4 473 aaKnown RBP8.23□□□□□ -1.09
CD46-208ENST00000367042 SCIMPQ6UWF3 145 aa8.23□□□□□ -1.09
CD46-208ENST00000367042 OSTM1Q86WC4 334 aa8.23□□□□□ -1.09
CD46-208ENST00000367042 CAMK1DQ8IU85 385 aa8.23□□□□□ -1.09
CD46-208ENST00000367042 CPSF7Q8N684 471 aaKnown RBP8.23□□□□□ -1.09
CD46-208ENST00000367042 NAT16Q8N8M0 369 aa8.23□□□□□ -1.09
CD46-208ENST00000367042 OR2T34Q8NGX1 318 aa8.23□□□□□ -1.09
CD46-208ENST00000367042 OR2T3Q8NH03 318 aa8.23□□□□□ -1.09
CD46-208ENST00000367042 ISOC1Q96CN7 298 aa8.23□□□□□ -1.09
CD46-208ENST00000367042 MAML3Q96JK9 1138 aa8.23□□□□□ -1.09
CD46-208ENST00000367042 ZFP42Q96MM3 310 aa8.23□□□□□ -1.09
CD46-208ENST00000367042 PLEKHG4BQ96PX9 1271 aa8.23□□□□□ -1.09
CD46-208ENST00000367042 MTG1Q9BT17 334 aaPredicted RBP8.23□□□□□ -1.09
CD46-208ENST00000367042 ADI1Q9BV57 179 aa8.23□□□□□ -1.09
CD46-208ENST00000367042 COLEC11Q9BWP8 271 aa8.23□□□□□ -1.09
CD46-208ENST00000367042 OSBPL6Q9BZF3 934 aa8.23□□□□□ -1.09
CD46-208ENST00000367042 PLGRKTQ9HBL7 147 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms