RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 SEL1L2Q5TEA6 688 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 SLC9A4Q6AI14 798 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 CXorf57Q6NSI4 855 aaKnown RBP8.32□□□□□ -1.08
MRPL55-211ENST00000366738 NPNTQ6UXI9 565 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 LRRC31Q6UY01 552 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 MFN1Q8IWA4 741 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 RCOR2Q8IZ40 523 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 APCDD1Q8J025 514 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 CARNMT1Q8N4J0 409 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 AADATQ8N5Z0 425 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 RTL3Q8N8U3 475 aaKnown RBP8.32□□□□□ -1.08
MRPL55-211ENST00000366738 HJURPQ8NCD3 748 aaPredicted RBP8.32□□□□□ -1.08
MRPL55-211ENST00000366738 LRRN4Q8WUT4 740 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 HAUS1Q96CS2 278 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 CELF6Q96J87 481 aaKnown RBP8.32□□□□□ -1.08
MRPL55-211ENST00000366738 CAPZA3Q96KX2 299 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 RNF157Q96PX1 679 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 FAM129BQ96TA1 746 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 FAM118BQ9BPY3 351 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 DDX50Q9BQ39 737 aaKnown RBP8.32□□□□□ -1.08
MRPL55-211ENST00000366738 OSBPL8Q9BZF1 889 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 ZYG11BQ9C0D3 744 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 KLC2Q9H0B6 622 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 BTBD1Q9H0C5 482 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 PABPC3Q9H361 631 aaKnown RBP8.32□□□□□ -1.08
MRPL55-211ENST00000366738 NOL6Q9H6R4 1146 aaKnown RBP8.32□□□□□ -1.08
MRPL55-211ENST00000366738 TMEM51Q9NW97 253 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 RCOR3Q9P2K3 495 aaPredicted RBP8.32□□□□□ -1.08
MRPL55-211ENST00000366738 PCDHB1Q9Y5F3 818 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 NBASA2RRP1 2371 aa8.32□□□□□ -1.08
MRPL55-211ENST00000366738 A0A1B0GVM2 712 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 A0A1W2PP55 124 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 TCAF2A6NFQ2 919 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 WASH4PA8MWX3 477 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 ZNF487B1APH4 448 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 PDE2AO00408 941 aaPredicted RBP8.31□□□□□ -1.08
MRPL55-211ENST00000366738 APOL1O14791 398 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 MID1O15344 667 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 FGF10O15520 208 aaPredicted RBP8.31□□□□□ -1.08
MRPL55-211ENST00000366738 DAPK3O43293 454 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 CEP104O60308 925 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 CST8O60676 142 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 DNTTP04053 509 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 ATP5BP06576 529 aaKnown RBP8.31□□□□□ -1.08
MRPL55-211ENST00000366738 C1SP09871 688 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 RHOQP17081 205 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 GLDCP23378 1020 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 STK19P49842 368 aaPredicted RBP8.31□□□□□ -1.08
MRPL55-211ENST00000366738 CDH4P55283 916 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 PCBP4P57723 403 aaKnown RBP8.31□□□□□ -1.08
MRPL55-211ENST00000366738 ZBTB16Q05516 673 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 MTA1Q13330 715 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 KCTD19Q17RG1 926 aaPredicted RBP8.31□□□□□ -1.08
MRPL55-211ENST00000366738 FAM182AQ5T1J6 154 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 ZNF776Q68DI1 518 aaPredicted RBP8.31□□□□□ -1.08
MRPL55-211ENST00000366738 KIAA0895LQ68EN5 471 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 KDM7AQ6ZMT4 941 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 ARHGAP36Q6ZRI8 547 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 B4GALNT4Q76KP1 1039 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 PRICKLE2Q7Z3G6 844 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 VSIG1Q86XK7 387 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 SLC13A5Q86YT5 568 aaPredicted RBP8.31□□□□□ -1.08
MRPL55-211ENST00000366738 MMAAQ8IVH4 418 aaKnown RBP8.31□□□□□ -1.08
MRPL55-211ENST00000366738 MAP7D3Q8IWC1 876 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 ARHGAP12Q8IWW6 846 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 RASGEF1CQ8N431 466 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 ZNF248Q8NDW4 579 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 SAP25Q8TEE9 199 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 TTC9Q92623 222 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 PTPRN2Q92932 1015 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 WBP1Q96G27 269 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 RPL10LQ96L21 214 aaKnown RBP8.31□□□□□ -1.08
MRPL55-211ENST00000366738 ELF4Q99607 663 aaPredicted RBP8.31□□□□□ -1.08
MRPL55-211ENST00000366738 ACE2Q9BYF1 805 aaPredicted RBP8.31□□□□□ -1.08
MRPL55-211ENST00000366738 NEUROG2Q9H2A3 272 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 CATSPERBQ9H7T0 1116 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 TMEM248Q9NWD8 314 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 SAE1Q9UBE0 346 aaPredicted RBP8.31□□□□□ -1.08
MRPL55-211ENST00000366738 CLCA2Q9UQC9 943 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 ERVW-1Q9UQF0 538 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 R3HDM2Q9Y2K5 976 aaKnown RBP8.31□□□□□ -1.08
MRPL55-211ENST00000366738 SAR1BQ9Y6B6 198 aa8.31□□□□□ -1.08
MRPL55-211ENST00000366738 A0A0D9SEW6 157 aa8.3□□□□□ -1.08
MRPL55-211ENST00000366738 A0A1W2PR77 199 aa8.3□□□□□ -1.08
MRPL55-211ENST00000366738 TYW5A2RUC4 315 aaKnown RBP8.3□□□□□ -1.08
MRPL55-211ENST00000366738 FAM47DPA6NHR8 397 aa8.3□□□□□ -1.08
MRPL55-211ENST00000366738 KIF2AO00139 706 aaPredicted RBP8.3□□□□□ -1.08
MRPL55-211ENST00000366738 RNF103O00237 685 aa8.3□□□□□ -1.08
MRPL55-211ENST00000366738 VILLO15195 856 aa8.3□□□□□ -1.08
MRPL55-211ENST00000366738 FGGP02679 453 aa8.3□□□□□ -1.08
MRPL55-211ENST00000366738 RHOCP08134 193 aa8.3□□□□□ -1.08
MRPL55-211ENST00000366738 CDK4P11802 303 aa8.3□□□□□ -1.08
MRPL55-211ENST00000366738 TCP1P17987 556 aaKnown RBP8.3□□□□□ -1.08
MRPL55-211ENST00000366738 MZF1P28698 734 aaPredicted RBP8.3□□□□□ -1.08
MRPL55-211ENST00000366738 EPHA8P29322 1005 aaPredicted RBP8.3□□□□□ -1.08
MRPL55-211ENST00000366738 OR1E1P30953 314 aa8.3□□□□□ -1.08
MRPL55-211ENST00000366738 HTR7P34969 479 aa8.3□□□□□ -1.08
MRPL55-211ENST00000366738 DRD3P35462 400 aa8.3□□□□□ -1.08
MRPL55-211ENST00000366738 ACVRL1P37023 503 aa8.3□□□□□ -1.08
MRPL55-211ENST00000366738 HCAR3P49019 387 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms