RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 HTR3CQ8WXA8 447 aa7.46□□□□□ -1.22
CLCN3-202ENST00000360642 TSPAN18Q96SJ8 248 aa7.46□□□□□ -1.22
CLCN3-202ENST00000360642 RNPEPL1Q9HAU8 725 aa7.46□□□□□ -1.22
CLCN3-202ENST00000360642 SP110Q9HB58 689 aa7.46□□□□□ -1.22
CLCN3-202ENST00000360642 ARL8BQ9NVJ2 186 aa7.46□□□□□ -1.22
CLCN3-202ENST00000360642 NKX1-2Q9UD57 310 aaPredicted RBP7.46□□□□□ -1.22
CLCN3-202ENST00000360642 KAT6AQ92794 2004 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 KLHL33A6NCF5 533 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 XPO1O14980 1071 aaKnown RBP7.45□□□□□ -1.22
CLCN3-202ENST00000360642 CCDC22O60826 627 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 FAM87AP0C7U9 286 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 SMIM10L2AP0DMW4 78 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 SMIM10L2BP0DMW5 78 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 CALB2P22676 271 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 AXLP30530 894 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 PPM1FP49593 454 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-202ENST00000360642 CDK18Q07002 472 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 SLC25A52Q3SY17 297 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 EFHC1Q5JVL4 640 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 ANKRD20A2Q5SQ80 823 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 ANKRD20A1Q5TYW2 823 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 ANKRD20A3Q5VUR7 823 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 ARHGAP36Q6ZRI8 547 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 DPP9Q86TI2 863 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 HACE1Q8IYU2 909 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 PYROXD2Q8N2H3 581 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 RAB3IL1Q8TBN0 382 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 SLC2A14Q8TDB8 520 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 TFB1MQ8WVM0 346 aaKnown RBP7.45□□□□□ -1.22
CLCN3-202ENST00000360642 PRR11Q96HE9 360 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-202ENST00000360642 MYCBPQ99417 103 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-202ENST00000360642 BTBD10Q9BSF8 475 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 SLC12A9Q9BXP2 914 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 CADM1Q9BY67 442 aaKnown RBP7.45□□□□□ -1.22
CLCN3-202ENST00000360642 FAM49AQ9H0Q0 323 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-202ENST00000360642 GINS2Q9Y248 185 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 FAM237BA0A1B0GVD1 139 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 DIAPH2O60879 1101 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 SNNO75324 88 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-202ENST00000360642 HAUS5O94927 633 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 AGR2O95994 175 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 TKTP29401 623 aaKnown RBP7.45□□□□□ -1.22
CLCN3-202ENST00000360642 FDFT1P37268 417 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 PNPLA4P41247 253 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 SERPINB9P50453 376 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 GPR85P60893 370 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 OCRLQ01968 901 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 BMPR2Q13873 1038 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 UBXN11Q5T124 520 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 STXBP5Q5T5C0 1151 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 CEP68Q76N32 757 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 ADGRF2Q8IZF7 708 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 MAB21L3Q8N8X9 362 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 NSL1Q96IY1 281 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 SPATA13Q96N96 652 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 ZNF570Q96NI8 536 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 MECRQ9BV79 373 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 IQCGQ9H095 443 aaKnown RBP7.45□□□□□ -1.22
CLCN3-202ENST00000360642 DENND2DQ9H6A0 471 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-202ENST00000360642 MAN1C1Q9NR34 630 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 EIF2B3Q9NR50 452 aaKnown RBP7.45□□□□□ -1.22
CLCN3-202ENST00000360642 FBXO6Q9NRD1 293 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-202ENST00000360642 GPR27Q9NS67 375 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 CLDND1Q9NY35 253 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 CORO2BQ9UQ03 480 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 RWDD3Q9Y3V2 267 aa7.45□□□□□ -1.22
CLCN3-202ENST00000360642 E7ENQ6 273 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 CYB561D2O14569 222 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 BIRC5O15392 142 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 GSC2O15499 205 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 GSRP00390 522 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 RPSAP08865 295 aaKnown RBP7.44□□□□□ -1.22
CLCN3-202ENST00000360642 TPBGLP0DKB5 382 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 MYL2P10916 166 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 WARSP23381 471 aaKnown RBP7.44□□□□□ -1.22
CLCN3-202ENST00000360642 CNTFP26441 200 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 LSSP48449 732 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 GLUD2P49448 558 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 NIPAL4Q0D2K0 466 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 BST1Q10588 318 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 RTP2Q5QGT7 225 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 ACBD5Q5T8D3 534 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-202ENST00000360642 LRRC8BQ6P9F7 803 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 LYPD4Q6UWN0 246 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 MARK2Q7KZI7 788 aaKnown RBP7.44□□□□□ -1.22
CLCN3-202ENST00000360642 BZW1Q7L1Q6 419 aaKnown RBP7.44□□□□□ -1.22
CLCN3-202ENST00000360642 PIGZQ86VD9 579 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 LIX1LQ8IVB5 337 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 DEFB106AQ8N104 65 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 APPL2Q8NEU8 664 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 ARNTL2Q8WYA1 636 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 N4BP2L2Q92802 583 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-202ENST00000360642 TMEM169Q96HH4 297 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 ZNF560Q96MR9 790 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 HNRNPABQ99729 332 aaKnown RBP7.44□□□□□ -1.22
CLCN3-202ENST00000360642 DUSP16Q9BY84 665 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 SLC13A1Q9BZW2 595 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 CXorf56Q9H5V9 222 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 C1GALT1Q9NS00 363 aa7.44□□□□□ -1.22
CLCN3-202ENST00000360642 MSRAQ9UJ68 235 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms