RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 CRACR2AQ9BSW2 395 aa14.01□□□□□ -0.17
VPS29-201ENST00000360579 PDCL3Q9H2J4 239 aa14.01□□□□□ -0.17
VPS29-201ENST00000360579 ADNPQ9H2P0 1102 aa14.01□□□□□ -0.17
VPS29-201ENST00000360579 MBNL1Q9NR56 388 aaKnown RBP14.01□□□□□ -0.17
VPS29-201ENST00000360579 TMPRSS4Q9NRS4 437 aa14.01□□□□□ -0.17
VPS29-201ENST00000360579 AKAP7Q9P0M2 348 aaPredicted RBP14.01□□□□□ -0.17
VPS29-201ENST00000360579 CTNND2Q9UQB3 1225 aa14.01□□□□□ -0.17
VPS29-201ENST00000360579 LRRK2Q5S007 2527 aa14.01□□□□□ -0.17
VPS29-201ENST00000360579 PRAMEF33A0A0G2JMD5 474 aa14□□□□□ -0.17
VPS29-201ENST00000360579 ZSCAN5CA6NGD5 496 aaPredicted RBP14□□□□□ -0.17
VPS29-201ENST00000360579 PRAMEF10O60809 474 aa14□□□□□ -0.17
VPS29-201ENST00000360579 GLB1P16278 677 aa14□□□□□ -0.17
VPS29-201ENST00000360579 SLC9A1P19634 815 aa14□□□□□ -0.17
VPS29-201ENST00000360579 GABRB2P47870 512 aa14□□□□□ -0.17
VPS29-201ENST00000360579 BPIFB4P59827 614 aa14□□□□□ -0.17
VPS29-201ENST00000360579 ZFP36L1Q07352 338 aaKnown RBP14□□□□□ -0.17
VPS29-201ENST00000360579 ELP6Q0PNE2 266 aa14□□□□□ -0.17
VPS29-201ENST00000360579 PAK1Q13153 545 aa14□□□□□ -0.17
VPS29-201ENST00000360579 SRSF6Q13247 344 aaKnown RBP14□□□□□ -0.17
VPS29-201ENST00000360579 NFATC4Q14934 902 aa14□□□□□ -0.17
VPS29-201ENST00000360579 IRF4Q15306 451 aa14□□□□□ -0.17
VPS29-201ENST00000360579 ALG11Q2TAA5 492 aa14□□□□□ -0.17
VPS29-201ENST00000360579 ENPP7Q6UWV6 458 aa14□□□□□ -0.17
VPS29-201ENST00000360579 VASH2Q86V25 355 aa14□□□□□ -0.17
VPS29-201ENST00000360579 DTX1Q86Y01 620 aa14□□□□□ -0.17
VPS29-201ENST00000360579 LURAP1LQ8IV03 231 aa14□□□□□ -0.17
VPS29-201ENST00000360579 GPR156Q8NFN8 814 aa14□□□□□ -0.17
VPS29-201ENST00000360579 TSACCQ96A04 125 aaPredicted RBP14□□□□□ -0.17
VPS29-201ENST00000360579 C18orf8Q96DM3 657 aa14□□□□□ -0.17
VPS29-201ENST00000360579 GDAP1L1Q96MZ0 367 aa14□□□□□ -0.17
VPS29-201ENST00000360579 MAGEH1Q9H213 219 aa14□□□□□ -0.17
VPS29-201ENST00000360579 ANKMY1Q9P2S6 941 aa14□□□□□ -0.17
VPS29-201ENST00000360579 DKK3Q9UBP4 350 aa14□□□□□ -0.17
VPS29-201ENST00000360579 KLQ9UEF7 1012 aa14□□□□□ -0.17
VPS29-201ENST00000360579 ACTL7AQ9Y615 435 aa14□□□□□ -0.17
VPS29-201ENST00000360579 GTPBP10A4D1E9 387 aaKnown RBP13.99□□□□□ -0.17
VPS29-201ENST00000360579 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.99□□□□□ -0.17
VPS29-201ENST00000360579 SNPHO15079 494 aa13.99□□□□□ -0.17
VPS29-201ENST00000360579 TNFP01375 233 aa13.99□□□□□ -0.17
VPS29-201ENST00000360579 RHOQP17081 205 aa13.99□□□□□ -0.17
VPS29-201ENST00000360579 ITIH1P19827 911 aa13.99□□□□□ -0.17
VPS29-201ENST00000360579 XPAP23025 273 aaPredicted RBP13.99□□□□□ -0.17
VPS29-201ENST00000360579 ACVRL1P37023 503 aa13.99□□□□□ -0.17
VPS29-201ENST00000360579 STX17P56962 302 aa13.99□□□□□ -0.17
VPS29-201ENST00000360579 SRP54P61011 504 aaKnown RBP13.99□□□□□ -0.17
VPS29-201ENST00000360579 NRG1Q02297 640 aaPredicted RBP13.99□□□□□ -0.17
VPS29-201ENST00000360579 EXOC3L4Q17RC7 722 aa13.99□□□□□ -0.17
VPS29-201ENST00000360579 CERCAMQ5T4B2 595 aa13.99□□□□□ -0.17
VPS29-201ENST00000360579 ARTNQ5T4W7 220 aa13.99□□□□□ -0.17
VPS29-201ENST00000360579 RD3Q7Z3Z2 195 aa13.99□□□□□ -0.17
VPS29-201ENST00000360579 BNIPLQ7Z465 357 aa13.99□□□□□ -0.17
VPS29-201ENST00000360579 SLC47A2Q86VL8 602 aa13.99□□□□□ -0.17
VPS29-201ENST00000360579 FAM131BQ86XD5 332 aa13.99□□□□□ -0.17
VPS29-201ENST00000360579 ZFAND4Q86XD8 727 aa13.99□□□□□ -0.17
VPS29-201ENST00000360579 Q8N9G6 341 aaPredicted RBP13.99□□□□□ -0.17
VPS29-201ENST00000360579 MSANTD4Q8NCY6 345 aa13.99□□□□□ -0.17
VPS29-201ENST00000360579 CASKIN2Q8WXE0 1202 aa13.99□□□□□ -0.17
VPS29-201ENST00000360579 USP7Q93009 1102 aa13.99□□□□□ -0.17
VPS29-201ENST00000360579 RBM15Q96T37 977 aaKnown RBP eCLIP13.99□□□□□ -0.17
VPS29-201ENST00000360579 WRAP53Q9BUR4 548 aaKnown RBP13.99□□□□□ -0.17
VPS29-201ENST00000360579 DGKBQ9Y6T7 804 aa13.99□□□□□ -0.17
VPS29-201ENST00000360579 STMND1H3BQB6 276 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 RAMP2O60895 175 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 IGSF6O95976 241 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 CDH5P33151 784 aaPredicted RBP13.98□□□□□ -0.17
VPS29-201ENST00000360579 FLT3P36888 993 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 MAPK10P53779 464 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 ARHGEF7Q14155 803 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 UBAP2LQ14157 1087 aaKnown RBP13.98□□□□□ -0.17
VPS29-201ENST00000360579 TMEM52BQ4KMG9 183 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 LRRC73Q5JTD7 316 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 RWDD4Q6NW29 188 aaKnown RBP13.98□□□□□ -0.17
VPS29-201ENST00000360579 BORAQ6PGQ7 559 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 ARCQ7LC44 396 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 SPRED1Q7Z699 444 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 XYLT1Q86Y38 959 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 ZNF564Q8TBZ8 553 aaPredicted RBP13.98□□□□□ -0.17
VPS29-201ENST00000360579 HCAR2Q8TDS4 363 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 VOPP1Q96AW1 172 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 WDR92Q96MX6 357 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 FUCA2Q9BTY2 467 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 APOOQ9BUR5 198 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 TTYH3Q9C0H2 523 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 PLCB1Q9NQ66 1216 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 TMEM248Q9NWD8 314 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 FOXJ2Q9P0K8 574 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 OR12D3Q9UGF7 316 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 MFHAS1Q9Y4C4 1052 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 RNF215Q9Y6U7 377 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 RELNP78509 3460 aa13.98□□□□□ -0.17
VPS29-201ENST00000360579 C9orf172C9J069 976 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 ZW10O43264 779 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 NUDT21O43809 227 aaKnown RBP13.97□□□□□ -0.17
VPS29-201ENST00000360579 GP1BBP13224 206 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 TIMP2P16035 220 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 BMP6P22004 513 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 CLCN1P35523 988 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 ATP1A2P50993 1020 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 CYP4F2P78329 520 aa13.97□□□□□ -0.17
VPS29-201ENST00000360579 INPP5AQ14642 412 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms