RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 TCP10LQ8TDR4 215 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 KAT5Q92993 513 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 CD101Q93033 1021 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 ACSS3Q9H6R3 686 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 CYP3A43Q9HB55 503 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 DYRK4Q9NR20 520 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 IPO11Q9UI26 975 aaKnown RBP10.02□□□□□ -0.81
SIN3A-201ENST00000360439 ASB3Q9Y575 518 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 CDY1Q9Y6F8 540 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 APOC4-APOC2K7ER74 178 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 CLOCKO15516 846 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 APOC2P02655 101 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 CYP1A1P04798 512 aaPredicted RBP10.01□□□□□ -0.81
SIN3A-201ENST00000360439 ITIH1P19827 911 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 TNFSF9P41273 254 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 CLK1P49759 484 aaKnown RBP10.01□□□□□ -0.81
SIN3A-201ENST00000360439 ARHGDIAP52565 204 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 COTL1Q14019 142 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 MAPRE2Q15555 327 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 MAJINQ3KP22 176 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 HECTD3Q5T447 861 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 CYP20A1Q6UW02 462 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 CHSY1Q86X52 802 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 HERVK_113Q902F9 699 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 PLEKHA8Q96JA3 519 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 TMEM121Q9BTD3 319 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 ING2Q9H160 280 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 TLE6Q9H808 572 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 SP110Q9HB58 689 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 SHANK3Q9BYB0 1731 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 KITP10721 976 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 PSMC3P17980 439 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 COPAP53621 1224 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 MYBPC1Q00872 1141 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 MAP3K10Q02779 954 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 RAD51Q06609 339 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 CCDC85BQ15834 202 aaPredicted RBP10.01□□□□□ -0.81
SIN3A-201ENST00000360439 KCNJ8Q15842 424 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 USP41Q3LFD5 358 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 UBE2UQ5VVX9 321 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 VSTM1Q6UX27 236 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 MFSD7Q6UXD7 560 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 POU5F2Q8N7G0 328 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 RNASE11Q8TAA1 199 aaKnown RBP10.01□□□□□ -0.81
SIN3A-201ENST00000360439 ZFP42Q96MM3 310 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 TSEN34Q9BSV6 310 aaKnown RBP10.01□□□□□ -0.81
SIN3A-201ENST00000360439 SLC13A1Q9BZW2 595 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 ABCB10Q9NRK6 738 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 MALT1Q9UDY8 824 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 LRRC42Q9Y546 428 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 CNTNAP2Q9UHC6 1331 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 BRWD3Q6RI45 1802 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 TAF1P21675 1872 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 COL2A1P02458 1487 aaPredicted RBP10.01□□□□□ -0.81
SIN3A-201ENST00000360439 hCG_1818297A0A087WSY0 165 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 NFICP08651 508 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 PPP1R26Q5T8A7 1209 aaPredicted RBP10.01□□□□□ -0.81
SIN3A-201ENST00000360439 TTC7BQ86TV6 843 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 CACTIN-AS1Q8N1I8 211 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 POC5Q8NA72 575 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 ZNF606Q8WXB4 792 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 ZNF333Q96JL9 665 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 NIFKQ9BYG3 293 aaKnown RBP10.01□□□□□ -0.81
SIN3A-201ENST00000360439 SMPD4Q9NXE4 827 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 SPG21Q9NZD8 308 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 ZNF221Q9UK13 617 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 PSMD3O43242 534 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 SNAP29O95721 258 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 ADH1AP07327 375 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 ATXN8OSP0DMR3 200 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 NR1H2P55055 460 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 TSTA3Q13630 321 aaPredicted RBP10.01□□□□□ -0.81
SIN3A-201ENST00000360439 RAPH1Q70E73 1250 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 ECHDC2Q86YB7 292 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 GDPD5Q8WTR4 605 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 TMEM174Q8WUU8 243 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 NAT9Q9BTE0 207 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 SIAEQ9HAT2 523 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 NTN4Q9HB63 628 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 SIRPGQ9P1W8 387 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 NR2E1Q9Y466 385 aa10.01□□□□□ -0.81
SIN3A-201ENST00000360439 DFFAO00273 331 aa10□□□□□ -0.81
SIN3A-201ENST00000360439 SPATA31D3P0C874 917 aa10□□□□□ -0.81
SIN3A-201ENST00000360439 FGFR1P11362 822 aa10□□□□□ -0.81
SIN3A-201ENST00000360439 SAT1P21673 171 aa10□□□□□ -0.81
SIN3A-201ENST00000360439 VARSP26640 1264 aaKnown RBP10□□□□□ -0.81
SIN3A-201ENST00000360439 NDST1P52848 882 aa10□□□□□ -0.81
SIN3A-201ENST00000360439 EFEMP1Q12805 493 aa10□□□□□ -0.81
SIN3A-201ENST00000360439 EFHC1Q5JVL4 640 aa10□□□□□ -0.81
SIN3A-201ENST00000360439 DGKKQ5KSL6 1271 aa10□□□□□ -0.81
SIN3A-201ENST00000360439 WSCD1Q658N2 575 aa10□□□□□ -0.81
SIN3A-201ENST00000360439 SPATA31D4Q6ZUB0 917 aa10□□□□□ -0.81
SIN3A-201ENST00000360439 ANKS1BQ7Z6G8 1248 aa10□□□□□ -0.81
SIN3A-201ENST00000360439 FITM2Q8N6M3 262 aa10□□□□□ -0.81
SIN3A-201ENST00000360439 NKD2Q969F2 451 aaPredicted RBP10□□□□□ -0.81
SIN3A-201ENST00000360439 PPP1R2P1Q96PQ5 205 aa10□□□□□ -0.81
SIN3A-201ENST00000360439 MUC3BQ9H195 1237 aa10□□□□□ -0.81
SIN3A-201ENST00000360439 KLHL8Q9P2G9 620 aaPredicted RBP10□□□□□ -0.81
SIN3A-201ENST00000360439 AP3M1Q9Y2T2 418 aa10□□□□□ -0.81
SIN3A-201ENST00000360439 RNF103-CHMP3A0A140T963 221 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms