RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 HIPK4Q8NE63 616 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 PIP4K2CQ8TBX8 421 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 SGF29Q96ES7 293 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 HMCESQ96FZ2 354 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 LENG8Q96PV6 779 aaPredicted RBP9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 SEPT5Q99719 369 aaPredicted RBP9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 SUDS3Q9H7L9 328 aaPredicted RBP9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 TRPC7Q9HCX4 862 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 TREX1Q9NSU2 369 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 TRMT13Q9NUP7 481 aaKnown RBP9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 PDP2Q9P2J9 529 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 WASF2Q9Y6W5 498 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 SMNDC1O75940 238 aaKnown RBP eCLIP9.38□□□□□ -0.917e-6■■■□□ 17.8
GTF3C2-202ENST00000359541 FGF1P05230 155 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 OR1E1P30953 314 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 SLC26A3P40879 764 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 RARS2Q5T160 578 aaKnown RBP9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 FAM171A1Q5VUB5 890 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 TRIM67Q6ZTA4 783 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 LRGUKQ96M69 825 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 ASB2Q96Q27 587 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 OXCT2Q9BYC2 517 aaPredicted RBP9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 KLHL4Q9C0H6 718 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 WDR55Q9H6Y2 383 aaPredicted RBP9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 ZNF195O14628 629 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 CFLARO15519 480 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 HOXA2O43364 376 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 DLX3O60479 287 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 GLP2RO95838 553 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 IGHA2P01877 340 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 ITGB1P05556 798 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 GLDCP23378 1020 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 PBX3P40426 434 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 ARCN1P48444 511 aaKnown RBP9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 PRKCZQ05513 592 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 EIF4EBP2Q13542 120 aaPredicted RBP9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 ACAP2Q15057 778 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 MS4A13Q5J8X5 152 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 RALGPS1Q5JS13 557 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 AFMIDQ63HM1 303 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 RAP1GAP2Q684P5 730 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 DENND5AQ6IQ26 1287 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 FRMD7Q6ZUT3 714 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 PTAR1Q7Z6K3 402 aaPredicted RBP9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 C14orf80Q86SX3 495 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 PHTF2Q8N3S3 785 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 KLHDC9Q8NEP7 349 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 PEX13Q92968 403 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 CATSPER2Q96P56 530 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 GBP5Q96PP8 586 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 OR52B2Q96RD2 323 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 ECSITQ9BQ95 431 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 C1QTNF1Q9BXJ1 281 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 PFDN4Q9NQP4 134 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 POMPQ9Y244 141 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 FIS1Q9Y3D6 152 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 PCDHB7Q9Y5E2 793 aa9.38□□□□□ -0.91
GTF3C2-202ENST00000359541 DOCK3Q8IZD9 2030 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 MOXD2PA6NHM9 499 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 IPO13O94829 963 aaKnown RBP9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 HMBSP08397 361 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 SERPINF2P08697 491 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 ENO3P13929 434 aaPredicted RBP9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 ERFP50548 548 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 FLOT2Q14254 428 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 GRAMD1BQ3KR37 738 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 PIK3R6Q5UE93 754 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 ANO7Q6IWH7 933 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 GALNT7Q86SF2 657 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 CENPLQ8N0S6 344 aaPredicted RBP9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 HEXDCQ8WVB3 486 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 DPF3Q92784 378 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 DLG3Q92796 817 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 SLC39A13Q96H72 371 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 MFSD1Q9H3U5 465 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 RMI1Q9H9A7 625 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 DLGAP2Q9P1A6 1054 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 UXTQ9UBK9 157 aaPredicted RBP9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 STK39Q9UEW8 545 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 SLC2A6Q9UGQ3 507 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 GABRQQ9UN88 632 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 VWA7Q9Y334 891 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 SCN10AQ9Y5Y9 1956 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 ALDH2P05091 517 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 F7P08709 466 aaPredicted RBP9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 CCDC166P0CW27 439 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 GMPRP36959 345 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 CHRNA4P43681 627 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 LEPRP48357 1165 aaKnown RBP9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 MED21Q13503 144 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 TRIP10Q15642 601 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 TCHHL1Q5QJ38 904 aaPredicted RBP9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 HECTD2Q5U5R9 776 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 SDHAF4Q5VUM1 108 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 KDELC1Q6UW63 502 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 ICA1LQ8NDH6 482 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 PYDC1Q8WXC3 89 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 TMEM161AQ9NX61 479 aa9.37□□□□□ -0.91
GTF3C2-202ENST00000359541 VPS9D1Q9Y2B5 631 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms