RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 GOT1P17174 413 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 MAPKAPK2P49137 400 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 BNC1Q01954 994 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 GPR180Q86V85 440 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 MLPHQ9BV36 600 aaPredicted RBP14.93□□□□□ -0.02
CHD4-201ENST00000357008 CRISPLD1Q9H336 500 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 ERVK-5Q9HDB9 667 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 ZNF232Q9UNY5 417 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 ROBO3Q96MS0 1386 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 ATP6AP2A0A1C7CYW4 349 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 UBE2QL1A1L167 161 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 TULP2O00295 520 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 ATP6AP2O75787 350 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 TSPAN8P19075 237 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 OR52L1Q8NGH7 329 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 ASB8Q9H765 288 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 TOR4AQ9NXH8 423 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 EGFL7Q9UHF1 273 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 RAB26Q9ULW5 256 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 ARIH1Q9Y4X5 557 aaPredicted RBP14.93□□□□□ -0.02
CHD4-201ENST00000357008 CELF2O95319 508 aaKnown RBP14.93□□□□□ -0.02
CHD4-201ENST00000357008 HOXC6P09630 235 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 PTPRNQ16849 979 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 LIN52Q52LA3 116 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 POTEHQ6S545 545 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 APTXQ7Z2E3 356 aaKnown RBP14.93□□□□□ -0.02
CHD4-201ENST00000357008 POMGNT2Q8NAT1 580 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 EEF1AKMT1Q8WVE0 214 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 LGMNQ99538 433 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 TMEM109Q9BVC6 243 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 PTGFRNQ9P2B2 879 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 EFR3BQ9Y2G0 817 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 FADS3Q9Y5Q0 445 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 FFAR3O14843 346 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 GPR42O15529 346 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 TUFMP49411 452 aaKnown RBP14.93□□□□□ -0.02
CHD4-201ENST00000357008 MTTPP55157 894 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 PPIL2Q13356 520 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 PIGZQ86VD9 579 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 VSIG10LQ86VR7 867 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 ZC3H7AQ8IWR0 971 aaKnown RBP14.93□□□□□ -0.02
CHD4-201ENST00000357008 RBM15BQ8NDT2 890 aaKnown RBP14.93□□□□□ -0.02
CHD4-201ENST00000357008 C7orf26Q96N11 449 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 SLC12A4Q9UP95 1085 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 A8MUI8 341 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 MFSD10Q14728 455 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 HYIQ5T013 277 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 IRF2BP1Q8IU81 584 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 VGLL2Q8N8G2 317 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 NPAS2Q99743 824 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 SPON1Q9HCB6 807 aa14.93□□□□□ -0.02
CHD4-201ENST00000357008 CAPN8A6NHC0 703 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 KPNA5O15131 536 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 MTX3Q5HYI7 312 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 PSME2Q9UL46 239 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 SSR3Q9UNL2 185 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 MEGF6O75095 1541 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 H3BNX3 289 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 TGFB1I1O43294 461 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 SERPINA1P01009 418 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 VEGFAP15692 232 aaPredicted RBP14.92□□□□□ -0.02
CHD4-201ENST00000357008 HSPA14Q0VDF9 509 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 CTBP1Q13363 440 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 LPIN1Q14693 890 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 CWF19L1Q69YN2 538 aaKnown RBP14.92□□□□□ -0.02
CHD4-201ENST00000357008 FITM2Q8N6M3 262 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 MRPS7Q9Y2R9 242 aaKnown RBP14.92□□□□□ -0.02
CHD4-201ENST00000357008 TRAF6Q9Y4K3 522 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 SQORQ9Y6N5 450 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 COL3A1P02461 1466 aaPredicted RBP14.92□□□□□ -0.02
CHD4-201ENST00000357008 A0A088AWK7 358 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 BUD23O43709 281 aaKnown RBP14.92□□□□□ -0.02
CHD4-201ENST00000357008 SLC22A3O75751 556 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 OR6A2O95222 327 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 ZNF10P21506 573 aaPredicted RBP14.92□□□□□ -0.02
CHD4-201ENST00000357008 PLD1Q13393 1074 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 SPIDRQ14159 915 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 RNF220Q5VTB9 566 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 ITCHQ96J02 903 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 NFKBIZQ9BYH8 718 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 MRPL42Q9Y6G3 142 aaKnown RBP14.92□□□□□ -0.02
CHD4-201ENST00000357008 SSNA1O43805 119 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 LINC00032P0C843 101 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 ERCC2P18074 760 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 LGALS3BPQ08380 585 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 APOBEC3HQ6NTF7 200 aaKnown RBP14.92□□□□□ -0.02
CHD4-201ENST00000357008 OLFML1Q6UWY5 402 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 RHOJQ9H4E5 214 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 NOL11Q9H8H0 719 aaKnown RBP14.92□□□□□ -0.02
CHD4-201ENST00000357008 UXTQ9UBK9 157 aaPredicted RBP14.92□□□□□ -0.02
CHD4-201ENST00000357008 G3V2T6 193 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 NELFEP18615 380 aaKnown RBP14.92□□□□□ -0.02
CHD4-201ENST00000357008 CNTN2Q02246 1040 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 BLMHQ13867 455 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 WSCD1Q658N2 575 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 NKX2-3Q8TAU0 364 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 WDR18Q9BV38 432 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 ABHD16BQ9H3Z7 469 aa14.92□□□□□ -0.02
CHD4-201ENST00000357008 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.92□□□□□ -0.02
CHD4-201ENST00000357008 UBIAD1Q9Y5Z9 338 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms