RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 SEMA4DQ92854 862 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 FERD3LQ96RJ6 166 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 DMGDHQ9UI17 866 aaKnown RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 MRPS23Q9Y3D9 190 aaKnown RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 RAP2CQ9Y3L5 183 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 C2CD2Q9Y426 696 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 TECPR2O15040 1411 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 CASZ1Q86V15 1759 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 LPOP22079 712 aaPredicted RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 PRKAG1P54619 331 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 USP46P62068 366 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 XIAPP98170 497 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 GALNT3Q14435 633 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 NDUFA9Q16795 377 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 RGS21Q2M5E4 152 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 RAP1GAP2Q684P5 730 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 WDR59Q6PJI9 974 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 CHSY3Q70JA7 882 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 GPR180Q86V85 440 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 GJD3Q8N144 294 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 CPA6Q8N4T0 437 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 TOP6BLQ8N6T0 577 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 COL26A1Q96A83 441 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 PDGFDQ9GZP0 370 aaPredicted RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 ANKZF1Q9H8Y5 726 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 KIAA1522Q9P206 1035 aaPredicted RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 RAB21Q9UL25 225 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 SSR3Q9UNL2 185 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 RPL26L1Q9UNX3 145 aaKnown RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 CHKBQ9Y259 395 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 KCNE2Q9Y6J6 123 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 COL1A2P08123 1366 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 A0A0B4J269 797 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 RGSL1A5PLK6 1076 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 HAT1O14929 419 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 CHST10O43529 356 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 PROCP04070 461 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 COX4I1P13073 169 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 HDCP19113 662 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 CTNNB1P35222 781 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 IGFALSP35858 605 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 IDH2P48735 452 aaKnown RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 HSPA14Q0VDF9 509 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 DCTN2Q13561 401 aaKnown RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 CBX2Q14781 532 aaPredicted RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 MAPK11Q15759 364 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 LIPMQ5VYY2 423 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 FAM183BPQ6ZVS7 135 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 BEND5Q7L4P6 421 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 LRRC17Q8N6Y2 441 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 OR10H5Q8NGA6 315 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 ADAM32Q8TC27 787 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 PNMA5Q96PV4 448 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 MUC13Q9H3R2 512 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 AASDHPPTQ9NRN7 309 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 CKLFQ9UBR5 152 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 MAGEL2Q9UJ55 1249 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 SCAF8Q9UPN6 1271 aaKnown RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 C15orf41Q9Y2V0 281 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 ITSN1Q15811 1721 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 LIASO43766 372 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 FGBP02675 491 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 CHRNGP07510 517 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 HTR7P34969 479 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 PRKCIP41743 596 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 CBX5P45973 191 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 CCT3P49368 545 aaKnown RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 SOX10P56693 466 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 PSME3P61289 254 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 OLR1P78380 273 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 SPIBQ01892 262 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 MAMLD1Q13495 774 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 LAPTM5Q13571 262 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 TSHZ1Q6ZSZ6 1077 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 SMIM5Q71RC9 77 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 SPATA19Q7Z5L4 167 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 CCDC36Q8IYA8 594 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 ANKRD52Q8NB46 1076 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 OR52K1Q8NGK4 314 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 OR4A15Q8NGL6 344 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 MBOAT7Q96N66 472 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 P2RX7Q99572 595 aaKnown RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 HTATIP2Q9BUP3 242 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 LACRTQ9GZZ8 138 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 RRAGCQ9HB90 399 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 TMEM138Q9NPI0 162 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 RASSF1Q9NS23 344 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 PCYOX1Q9UHG3 505 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 TRIM17Q9Y577 477 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 ZC3H13Q5T200 1668 aaKnown RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 FAM86B1E9PN63 330 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 DDX3XO00571 662 aaKnown RBP eCLIP6.5□□□□□ -1.37
UPF2-201ENST00000356352 GRM6O15303 877 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 MAFO75444 373 aaPredicted RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 DNTTP04053 509 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 FAM86B2P0C5J1 330 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 SMIM10L2AP0DMW4 78 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 SMIM10L2BP0DMW5 78 aa6.5□□□□□ -1.37
UPF2-201ENST00000356352 SRP54P61011 504 aaKnown RBP6.5□□□□□ -1.37
UPF2-201ENST00000356352 PYDC2Q56P42 97 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms