RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 TMEM106CQ9BVX2 250 aa11.1□□□□□ -0.63
GTF3C1-201ENST00000356183 CHMP1AQ9HD42 196 aaPredicted RBP11.1□□□□□ -0.63
GTF3C1-201ENST00000356183 PRELID1Q9Y255 219 aa11.1□□□□□ -0.63
GTF3C1-201ENST00000356183 AP3M1Q9Y2T2 418 aa11.1□□□□□ -0.63
GTF3C1-201ENST00000356183 SLC28A2O43868 658 aa11.1□□□□□ -0.63
GTF3C1-201ENST00000356183 LYPLA1O75608 230 aaPredicted RBP11.1□□□□□ -0.63
GTF3C1-201ENST00000356183 IFNA6P05013 189 aa11.1□□□□□ -0.63
GTF3C1-201ENST00000356183 THRBP10828 461 aa11.1□□□□□ -0.63
GTF3C1-201ENST00000356183 RENBPP51606 427 aa11.1□□□□□ -0.63
GTF3C1-201ENST00000356183 CLCN3P51790 818 aa11.1□□□□□ -0.63
GTF3C1-201ENST00000356183 TRIM74Q86UV6 250 aa11.1□□□□□ -0.63
GTF3C1-201ENST00000356183 TRIM73Q86UV7 250 aa11.1□□□□□ -0.63
GTF3C1-201ENST00000356183 FAM47BQ8NA70 645 aa11.1□□□□□ -0.63
GTF3C1-201ENST00000356183 SETD6Q8TBK2 473 aa11.1□□□□□ -0.63
GTF3C1-201ENST00000356183 TSPAN16Q9UKR8 245 aa11.1□□□□□ -0.63
GTF3C1-201ENST00000356183 MDM4O15151 490 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 PIAS1O75925 651 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 IFNA16P05015 189 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 RASA1P20936 1047 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 TRIM40Q6P9F5 258 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 PIK3C3Q8NEB9 887 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 SYTL5Q8TDW5 730 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 CEP295NLQ96MC4 621 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 DUSP9Q99956 384 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 TTYH1Q9H313 450 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 PSMD9O00233 223 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 SGTAO43765 313 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 RPS6KA4O75676 772 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 AKAP3O75969 853 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 CALCAP01258 141 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 CYP1A1P04798 512 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 SERPINF2P08697 491 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 SP100P23497 879 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 CHKAP35790 457 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 MMP13P45452 471 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 CA9Q16790 459 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 UBE2Q1Q7Z7E8 422 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 TMEM139Q8IV31 216 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 ABRAQ8N0Z2 381 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 ZNF366Q8N895 744 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 GSTCDQ8NEC7 633 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 OR52K1Q8NGK4 314 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 ETNPPLQ8TBG4 499 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 BLOC1S4Q9NUP1 217 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 RNF181Q9P0P0 153 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 KIAA1257Q9ULG3 409 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 TBC1D30Q9Y2I9 924 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 KCNK1O00180 336 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 SLC28A1O00337 649 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 PLIN3O60664 434 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 RB1P06400 928 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 CXCL8P10145 99 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 RPL9P32969 192 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 NDST1P52848 882 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 ARFIP1P53367 373 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 PTPN11Q06124 597 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 ACSM2AQ08AH3 577 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 ACSM2BQ68CK6 577 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 OAFQ86UD1 273 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 SATL1Q86VE3 508 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 OR2L5Q8NG80 312 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 VANGL1Q8TAA9 524 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 PIWIL2Q8TC59 973 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 MRPS31Q92665 395 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 DIRAS2Q96HU8 199 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 CDADC1Q9BWV3 514 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 CUEDC1Q9NWM3 386 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 SNTG2Q9NY99 539 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 DDX3YO15523 660 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 RAMP2O60895 175 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 SERPINA6P08185 405 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 MYL4P12829 197 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 YBX3P16989 372 aaKnown RBP eCLIP11.09□□□□□ -0.632e-6■■■■□ 23.6
GTF3C1-201ENST00000356183 TBX4P57082 545 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 TROAPQ12815 778 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 TNFAIP8L3Q5GJ75 292 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 ZNF772Q68DY9 489 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 EGFL6Q8IUX8 553 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 CYP4X1Q8N118 509 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 PTGR2Q8N8N7 351 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 PLA2G12BQ9BX93 195 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 PRKD2Q9BZL6 878 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 BMP7P18075 431 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 SGCGQ13326 291 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 DPYSQ14117 519 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 OVOS1Q6IE37 1185 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 GK5Q6ZS86 529 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 MINDY2Q8NBR6 621 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 UCMAQ8WVF2 138 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 ADGRE2Q9UHX3 823 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 CORO2BQ9UQ03 480 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 UGT2B11O75310 529 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 PRH1P02810 166 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 ACAT1P24752 427 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 CDKL1Q00532 357 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 APTXQ7Z2E3 356 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 SPPL2CQ8IUH8 684 aa11.09□□□□□ -0.63
GTF3C1-201ENST00000356183 AADATQ8N5Z0 425 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms