RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 PDE2AO00408 941 aaPredicted RBP13.3□□□□□ -0.28
SCN8A-202ENST00000355133 MSI1O43347 362 aaKnown RBP13.3□□□□□ -0.28
SCN8A-202ENST00000355133 SPATA31C1P0DKV0 1188 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 ELNP15502 786 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 LPOP22079 712 aaPredicted RBP13.3□□□□□ -0.28
SCN8A-202ENST00000355133 MC4RP32245 332 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 MTAPQ13126 283 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 MAPKAPK3Q16644 382 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 LYPLAL1Q5VWZ2 237 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 C9orf57Q5W0N0 161 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 C15orf52Q6ZUT6 534 aaKnown RBP13.3□□□□□ -0.28
SCN8A-202ENST00000355133 EIF3MQ7L2H7 374 aaKnown RBP13.3□□□□□ -0.28
SCN8A-202ENST00000355133 ZFP28Q8NHY6 868 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 SHC3Q92529 594 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 HDAC10Q969S8 669 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 RPRD1BQ9NQG5 326 aaKnown RBP13.3□□□□□ -0.28
SCN8A-202ENST00000355133 PCDHB9Q9Y5E1 797 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 ERAL1O75616 437 aaKnown RBP13.3□□□□□ -0.28
SCN8A-202ENST00000355133 LRATO95237 230 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 SLC25A14O95258 325 aaPredicted RBP13.3□□□□□ -0.28
SCN8A-202ENST00000355133 MED26O95402 600 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 ERBB2P04626 1255 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 SNRPB2P08579 225 aaKnown RBP13.3□□□□□ -0.28
SCN8A-202ENST00000355133 LINC00032P0C843 101 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 ARF4P18085 180 aaPredicted RBP13.3□□□□□ -0.28
SCN8A-202ENST00000355133 FLT3LGP49771 235 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 TRAF3Q13114 568 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 ITGB3BPQ13352 177 aaPredicted RBP13.3□□□□□ -0.28
SCN8A-202ENST00000355133 INO80DQ53TQ3 878 aaPredicted RBP13.3□□□□□ -0.28
SCN8A-202ENST00000355133 CHADLQ6NUI6 762 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 GPRIN3Q6ZVF9 776 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 TNS4Q8IZW8 715 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 KLHL23Q8NBE8 558 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 MMADHCQ9H3L0 296 aaPredicted RBP13.3□□□□□ -0.28
SCN8A-202ENST00000355133 COQ6Q9Y2Z9 468 aa13.3□□□□□ -0.28
SCN8A-202ENST00000355133 A0A1W2PQH9 124 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 EFCAB10A6NFE3 127 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 SASH3O75995 380 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 RECQL5O94762 991 aaPredicted RBP13.29□□□□□ -0.28
SCN8A-202ENST00000355133 NR2F1P10589 423 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 CDK18Q07002 472 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 DUSP4Q13115 394 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 PLK2Q9NYY3 685 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 PCYOX1Q9UHG3 505 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 PLA2G4EQ3MJ16 856 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 ZIK1Q3SY52 487 aaPredicted RBP13.29□□□□□ -0.28
SCN8A-202ENST00000355133 TOP6BLQ8N6T0 577 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 OR4L1Q8NH43 312 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 BAP1Q92560 729 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 LINGO1Q96FE5 620 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 PAIP1Q9H074 479 aaKnown RBP13.29□□□□□ -0.28
SCN8A-202ENST00000355133 MKL2Q9ULH7 1088 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 FARP2O94887 1054 aaPredicted RBP13.29□□□□□ -0.28
SCN8A-202ENST00000355133 OR4Q2P0C623 313 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 HNRNPLP14866 589 aaKnown RBP eCLIP13.29□□□□□ -0.28
SCN8A-202ENST00000355133 AUHQ13825 339 aaKnown RBP13.29□□□□□ -0.28
SCN8A-202ENST00000355133 CPSF6Q16630 551 aaKnown RBP eCLIP13.29□□□□□ -0.28
SCN8A-202ENST00000355133 ZACNQ401N2 412 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 FAM46CQ5VWP2 391 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 RASAL3Q86YV0 1011 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 OR52L1Q8NGH7 329 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 CKAP2Q8WWK9 683 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 PPP3R2Q96LZ3 170 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 MAT2BQ9NZL9 334 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 ASF1AQ9Y294 204 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 ATXN2Q99700 1313 aaKnown RBP13.29□□□□□ -0.28
SCN8A-202ENST00000355133 ARHGAP23Q9P227 1491 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 SLC28A1O00337 649 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 PAGE1O75459 146 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 ITGA2BP08514 1039 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 SLC35G4P0C7Q5 338 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 COX4I1P13073 169 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 HGFP14210 728 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 ZNF24P17028 368 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 SPDYCQ5MJ68 293 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 ZNF549Q6P9A3 640 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 R3HCC1LQ7Z5L2 792 aaKnown RBP13.29□□□□□ -0.28
SCN8A-202ENST00000355133 NELL1Q92832 810 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 MRPL57Q9BQC6 102 aaKnown RBP13.29□□□□□ -0.28
SCN8A-202ENST00000355133 CFAP97Q9P2B7 532 aa13.29□□□□□ -0.28
SCN8A-202ENST00000355133 MTF2Q9Y483 593 aaPredicted RBP13.29□□□□□ -0.28
SCN8A-202ENST00000355133 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.28□□□□□ -0.28
SCN8A-202ENST00000355133 LRRC10BA6NIK2 292 aa13.28□□□□□ -0.28
SCN8A-202ENST00000355133 GLUD1P00367 558 aa13.28□□□□□ -0.28
SCN8A-202ENST00000355133 ELFN1P0C7U0 828 aa13.28□□□□□ -0.28
SCN8A-202ENST00000355133 UBAP2LQ14157 1087 aaKnown RBP13.28□□□□□ -0.28
SCN8A-202ENST00000355133 PAGE2Q7Z2X7 111 aa13.28□□□□□ -0.28
SCN8A-202ENST00000355133 OFCC1Q8IZS5 231 aa13.28□□□□□ -0.28
SCN8A-202ENST00000355133 C8orf59Q8N0T1 100 aaPredicted RBP13.28□□□□□ -0.28
SCN8A-202ENST00000355133 PRELID2Q8N945 189 aa13.28□□□□□ -0.28
SCN8A-202ENST00000355133 REXO5Q96IC2 774 aaKnown RBP13.28□□□□□ -0.28
SCN8A-202ENST00000355133 TTPALQ9BTX7 342 aa13.28□□□□□ -0.28
SCN8A-202ENST00000355133 B3GNT5Q9BYG0 378 aa13.28□□□□□ -0.28
SCN8A-202ENST00000355133 AP3M1Q9Y2T2 418 aa13.28□□□□□ -0.28
SCN8A-202ENST00000355133 TMEM191CA6NGB0 347 aa13.28□□□□□ -0.28
SCN8A-202ENST00000355133 PSMG1O95456 288 aa13.28□□□□□ -0.28
SCN8A-202ENST00000355133 ZNF37AP17032 561 aaPredicted RBP13.28□□□□□ -0.28
SCN8A-202ENST00000355133 RGS1Q08116 209 aa13.28□□□□□ -0.28
SCN8A-202ENST00000355133 LRRC49Q8IUZ0 686 aa13.28□□□□□ -0.28
SCN8A-202ENST00000355133 SLC9A9Q8IVB4 645 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms