RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 KPNA4O00629 521 aaPredicted RBP9.46□□□□□ -0.9
SMG6-202ENST00000354901 TEX28O15482 410 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 GLRA3O75311 464 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 BAIAP3O94812 1187 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 BCL10O95999 233 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 GNAO1P09471 354 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 NR2C2P49116 596 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 IRF9Q00978 393 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 CERCAMQ5T4B2 595 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 TMTC4Q5T4D3 741 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 LAYNQ6UX15 382 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 STRA8Q7Z7C7 330 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 KBTBD6Q86V97 674 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 REM2Q8IYK8 340 aaPredicted RBP9.46□□□□□ -0.9
SMG6-202ENST00000354901 TTC39CQ8N584 583 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 LINC01465Q8N7H1 131 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 PPTC7Q8NI37 304 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 MFSD3Q96ES6 412 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 ZFP42Q96MM3 310 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 FCRL3Q96P31 734 aaPredicted RBP9.46□□□□□ -0.9
SMG6-202ENST00000354901 HGH1Q9BTY7 390 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 TP63Q9H3D4 680 aaPredicted RBP9.46□□□□□ -0.9
SMG6-202ENST00000354901 MKS1Q9NXB0 559 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 PLK2Q9NYY3 685 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 SCHIP1Q9P0W5 487 aaPredicted RBP9.46□□□□□ -0.9
SMG6-202ENST00000354901 SATB2Q9UPW6 733 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 SMIM28A0A1B0GU29 152 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 H3BMQ9 156 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 EEF2KO00418 725 aaKnown RBP9.46□□□□□ -0.9
SMG6-202ENST00000354901 HUS1O60921 280 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 RNASEH2AO75792 299 aaKnown RBP9.46□□□□□ -0.9
SMG6-202ENST00000354901 KLHL2O95198 593 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 GSRP00390 522 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 RALBP11234 206 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 COX4I1P13073 169 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 SMPD1P17405 629 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 MATKP42679 507 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 MAGEA6P43360 314 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 GLRBP48167 497 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 ART3Q13508 389 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 E2F2Q14209 437 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 IL23RQ5VWK5 629 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 KDELC2Q7Z4H8 507 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 DCLK2Q8N568 766 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 TMEM40Q8WWA1 233 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 EDEM1Q92611 657 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 COG8Q96MW5 612 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 TRPV5Q9NQA5 729 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 FIS1Q9Y3D6 152 aa9.46□□□□□ -0.9
SMG6-202ENST00000354901 TNFRSF10AO00220 468 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 HSPA4LO95757 839 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 POLBP06746 335 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 PRKACBP22694 351 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 AVPR1AP37288 418 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 CCR10P46092 362 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 COPZ1P61923 177 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 LSM3P62310 102 aaKnown RBP9.45□□□□□ -0.9
SMG6-202ENST00000354901 CLCQ05315 142 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 FAM214AQ32MH5 1076 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 NOTUMQ6P988 496 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 MAMDC4Q6UXC1 1216 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 PIWIL3Q7Z3Z3 882 aaKnown RBP9.45□□□□□ -0.9
SMG6-202ENST00000354901 MAVSQ7Z434 540 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 OSTM1Q86WC4 334 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 FIBCD1Q8N539 461 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 ACVR1CQ8NER5 493 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 CERS2Q96G23 380 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 CELF6Q96J87 481 aaKnown RBP9.45□□□□□ -0.9
SMG6-202ENST00000354901 CDH19Q9H159 772 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 SOX17Q9H6I2 414 aaPredicted RBP9.45□□□□□ -0.9
SMG6-202ENST00000354901 RPF2Q9H7B2 306 aaKnown RBP9.45□□□□□ -0.9
SMG6-202ENST00000354901 SNX15Q9NRS6 342 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 PIGVQ9NUD9 493 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 ZNHIT2Q9UHR6 403 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 FZD10Q9ULW2 581 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 ERVK-11Q9UQG0 969 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 FAM149AA5PLN7 773 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 AKAP10O43572 662 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 TIMM44O43615 452 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 SERPINE1P05121 402 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 ADSLP30566 484 aaPredicted RBP9.45□□□□□ -0.9
SMG6-202ENST00000354901 GJA5P36382 358 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 NUMBP49757 651 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 IST1P53990 364 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 MRPS15P82914 257 aaKnown RBP9.45□□□□□ -0.9
SMG6-202ENST00000354901 MS4A2Q01362 244 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 POU5F1BQ06416 359 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 PMS2P3Q13401 168 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 KYAT1Q16773 422 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 DCAF4L1Q3SXM0 396 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 WSCD1Q658N2 575 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 BNC2Q6ZN30 1099 aaPredicted RBP9.45□□□□□ -0.9
SMG6-202ENST00000354901 UBE2Q1Q7Z7E8 422 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 CATSPER1Q8NEC5 780 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 GPRC5AQ8NFJ5 357 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 CHPT1Q8WUD6 406 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 RCN3Q96D15 328 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 LENG8Q96PV6 779 aaPredicted RBP9.45□□□□□ -0.9
SMG6-202ENST00000354901 CITED4Q96RK1 184 aa9.45□□□□□ -0.9
SMG6-202ENST00000354901 SLC29A1Q99808 456 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms