RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 ANKS1BQ7Z6G8 1248 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 RBFAQ8N0V3 343 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 OR4K2Q8NGD2 314 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 TRIB2Q92519 343 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 FIG4Q92562 907 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 PLD4Q96BZ4 506 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 CROTQ9UKG9 612 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 FFAR3O14843 346 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 GPR42O15529 346 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 ATG7O95352 703 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 GRIA4P48058 902 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 PSMD8P48556 350 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 SLC16A1P53985 500 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 LRRC23Q53EV4 343 aaPredicted RBP14.99□□□□□ -0.01
COL17A1-201ENST00000353479 TAPT1Q6NXT6 567 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 TNS4Q8IZW8 715 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 MREGQ8N565 214 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 SUSD3Q96L08 255 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 NOD2Q9HC29 1040 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 MRASO14807 208 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 SNX32Q86XE0 403 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 OSCP1Q8WVF1 389 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 LINGO1Q96FE5 620 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 PCYT2Q99447 389 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 ARHGAP39Q9C0H5 1083 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 YIPF3Q9GZM5 350 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 RHBGQ9H310 441 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 TMCC3Q9ULS5 477 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 STARD13Q9Y3M8 1113 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 LAMB4A4D0S4 1761 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 SETD1AO15047 1707 aaKnown RBP14.99□□□□□ -0.01
COL17A1-201ENST00000353479 CYP7B1O75881 506 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 FLCNQ8NFG4 579 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 TWNKQ96RR1 684 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 GBA3Q9H227 469 aa14.99□□□□□ -0.01
COL17A1-201ENST00000353479 FCF1Q9Y324 198 aaKnown RBP14.99□□□□□ -0.01
COL17A1-201ENST00000353479 ABHD14A-ACY1A0A1B0GW23 586 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 PMM2O15305 246 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 USP1O94782 785 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 PPP2R1BP30154 601 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 PRR23CQ6ZRP0 262 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 CTU1Q7Z7A3 348 aaKnown RBP14.98□□□□□ -0.01
COL17A1-201ENST00000353479 CMC1Q7Z7K0 106 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 RTL3Q8N8U3 475 aaKnown RBP14.98□□□□□ -0.01
COL17A1-201ENST00000353479 SPATA22Q8NHS9 363 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 FBXL18Q96ME1 805 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 RPS6KB2Q9UBS0 482 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 INSL6Q9Y581 213 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 KANSL1LA0AUZ9 987 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 RRM2P31350 389 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 PTP4A2Q12974 167 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 GPM6BQ13491 265 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 CYB5D1Q6P9G0 228 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 TMC5Q6UXY8 1006 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 MRPL57Q9BQC6 102 aaKnown RBP14.98□□□□□ -0.01
COL17A1-201ENST00000353479 ACE2Q9BYF1 805 aaPredicted RBP14.98□□□□□ -0.01
COL17A1-201ENST00000353479 XPR1Q9UBH6 696 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 VWA7Q9Y334 891 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 PFDN1O60925 122 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 TBX18O95935 607 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 TPSB2P20231 275 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 VHLP40337 213 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 CORO7P57737 925 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 DAB2P98082 770 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 TPSAB1Q15661 275 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 C12orf50Q8NA57 414 aaPredicted RBP14.98□□□□□ -0.01
COL17A1-201ENST00000353479 IMPAD1Q9NX62 359 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 NUDT17P0C025 328 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 KRT20P35900 424 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 LDLRAD1Q5T700 205 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 NKD2Q969F2 451 aaPredicted RBP14.98□□□□□ -0.01
COL17A1-201ENST00000353479 MAGEH1Q9H213 219 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 LRRC4CQ9HCJ2 640 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 SOHLH2Q9NX45 425 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 SCN3BQ9NY72 215 aa14.98□□□□□ -0.01
COL17A1-201ENST00000353479 A0A1W2PRU2 124 aa14.97□□□□□ -0.01
COL17A1-201ENST00000353479 MAPKAPK2P49137 400 aa14.97□□□□□ -0.01
COL17A1-201ENST00000353479 VAC14Q08AM6 782 aa14.97□□□□□ -0.01
COL17A1-201ENST00000353479 CA9Q16790 459 aa14.97□□□□□ -0.01
COL17A1-201ENST00000353479 TPGS2Q68CL5 300 aa14.97□□□□□ -0.01
COL17A1-201ENST00000353479 CYP4Z1Q86W10 505 aa14.97□□□□□ -0.01
COL17A1-201ENST00000353479 ZNF567Q8N184 647 aa14.97□□□□□ -0.01
COL17A1-201ENST00000353479 RNF148Q8N7C7 305 aa14.97□□□□□ -0.01
COL17A1-201ENST00000353479 ACMSDQ8TDX5 336 aa14.97□□□□□ -0.01
COL17A1-201ENST00000353479 CKAP2Q8WWK9 683 aa14.97□□□□□ -0.01
COL17A1-201ENST00000353479 ZFYVE19Q96K21 471 aa14.97□□□□□ -0.01
COL17A1-201ENST00000353479 CHRAC1Q9NRG0 131 aa14.97□□□□□ -0.01
COL17A1-201ENST00000353479 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.97□□□□□ -0.01
COL17A1-201ENST00000353479 SNX6Q9UNH7 406 aa14.97□□□□□ -0.01
COL17A1-201ENST00000353479 ACTL7BQ9Y614 415 aa14.97□□□□□ -0.01
COL17A1-201ENST00000353479 CACNB4O00305 520 aaPredicted RBP14.97□□□□□ -0.01
COL17A1-201ENST00000353479 MAP2K7O14733 419 aa14.97□□□□□ -0.01
COL17A1-201ENST00000353479 RPP40O75818 363 aaKnown RBP14.97□□□□□ -0.01
COL17A1-201ENST00000353479 NDST3O95803 873 aa14.97□□□□□ -0.01
COL17A1-201ENST00000353479 EIF2S1P05198 315 aaKnown RBP14.97□□□□□ -0.01
COL17A1-201ENST00000353479 SLC35G4P0C7Q5 338 aa14.97□□□□□ -0.01
COL17A1-201ENST00000353479 S100A3P33764 101 aa14.97□□□□□ -0.01
COL17A1-201ENST00000353479 HPCAL1P37235 193 aa14.97□□□□□ -0.01
COL17A1-201ENST00000353479 SYPL2Q5VXT5 272 aa14.97□□□□□ -0.01
COL17A1-201ENST00000353479 ZNF398Q8TD17 642 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms