RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 SLC35E2BP0CK96 405 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 IRF1P10914 325 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 CPA3P15088 417 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 HDCP19113 662 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 GLDCP23378 1020 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 GRK2P25098 689 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 CRABP2P29373 138 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 BMPR1AP36894 532 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 GMPRP36959 345 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 ABCG1P45844 678 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 CD151P48509 253 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 ARSDP51689 593 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 CLCN5P51795 746 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 EPHA5P54756 1037 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 TAS2R39P59534 338 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 IRF9Q00978 393 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 POU4F1Q01851 419 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 OVGP1Q12889 678 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 CTBP1Q13363 440 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 THOC5Q13769 683 aaKnown RBP6.97□□□□□ -1.29
TRIM55-203ENST00000350034 SEPT6Q14141 434 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 USP10Q14694 798 aaKnown RBP6.97□□□□□ -1.29
TRIM55-203ENST00000350034 CTC1Q2NKJ3 1217 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 INO80DQ53TQ3 878 aaPredicted RBP6.97□□□□□ -1.29
TRIM55-203ENST00000350034 RALGPS1Q5JS13 557 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 TMEM240Q5SV17 173 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 MPP7Q5T2T1 576 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 RNF219Q5W0B1 726 aaPredicted RBP6.97□□□□□ -1.29
TRIM55-203ENST00000350034 TXNDC8Q6A555 127 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 IL31Q6EBC2 164 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 ZYG11AQ6WRX3 759 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 ATG14Q6ZNE5 492 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 ASRGL1Q7L266 308 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 RTL10Q7L3V2 364 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 KDELC2Q7Z4H8 507 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 ZNF354CQ86Y25 554 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 C10orf67Q8IYJ2 551 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 HS6ST3Q8IZP7 471 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 DCAF4L2Q8NA75 395 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 RDH11Q8TC12 318 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 PHOSPHO2Q8TCD6 241 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 BRSK1Q8TDC3 778 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 SCG3Q8WXD2 468 aaKnown RBP6.97□□□□□ -1.29
TRIM55-203ENST00000350034 HERVK_113Q902F9 699 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 SKA1Q96BD8 255 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 TMA16Q96EY4 203 aaKnown RBP6.97□□□□□ -1.29
TRIM55-203ENST00000350034 THOC1Q96FV9 657 aaKnown RBP6.97□□□□□ -1.29
TRIM55-203ENST00000350034 LMLNQ96KR4 655 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 GPR78Q96P69 363 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 SORT1Q99523 831 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 SPON2Q9BUD6 331 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 CINPQ9BW66 212 aaPredicted RBP6.97□□□□□ -1.29
TRIM55-203ENST00000350034 ZNF395Q9H8N7 513 aaPredicted RBP6.97□□□□□ -1.29
TRIM55-203ENST00000350034 CAB39LQ9H9S4 337 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 NOD2Q9HC29 1040 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 ZNF358Q9NW07 568 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 SMPD4Q9NXE4 827 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 KCNK4Q9NYG8 393 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 CXXC1Q9P0U4 656 aaPredicted RBP6.97□□□□□ -1.29
TRIM55-203ENST00000350034 LHX3Q9UBR4 397 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 MID2Q9UJV3 735 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 SLC39A10Q9ULF5 831 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 ZNF510Q9Y2H8 683 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 CPQQ9Y646 472 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 NUMBLQ9Y6R0 609 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 CAPN7Q9Y6W3 813 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 CHD5Q8TDI0 1954 aa6.97□□□□□ -1.29
TRIM55-203ENST00000350034 A0A087X1B8 175 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 CFAP73A6NFT4 308 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 C2orf71A6NGG8 1288 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 SOBPA7XYQ1 873 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.96□□□□□ -1.3
TRIM55-203ENST00000350034 TRAFD1O14545 582 aaPredicted RBP6.96□□□□□ -1.3
TRIM55-203ENST00000350034 AURKAO14965 403 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 ITM2AO43736 263 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 SNAP91O60641 907 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 TBL1XO60907 577 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 RPP40O75818 363 aaKnown RBP6.96□□□□□ -1.3
TRIM55-203ENST00000350034 ATP5HO75947 161 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 HAUS5O94927 633 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 UNC5CO95185 931 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 ATP5BP06576 529 aaKnown RBP6.96□□□□□ -1.3
TRIM55-203ENST00000350034 C8AP07357 584 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 SPATA31D3P0C874 917 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 T-ENOLP0DO92 83 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 NEFHP12036 1026 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 ALOX15P16050 662 aaPredicted RBP6.96□□□□□ -1.3
TRIM55-203ENST00000350034 GABRR2P28476 465 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 MZF1P28698 734 aaPredicted RBP6.96□□□□□ -1.3
TRIM55-203ENST00000350034 CDC25CP30307 473 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 ARRB2P32121 409 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 ZNF140P52738 457 aaPredicted RBP6.96□□□□□ -1.3
TRIM55-203ENST00000350034 PLK1P53350 603 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 ARFIP2P53365 341 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 PRKAA2P54646 552 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 ERVFC1P60507 584 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 RAB10P61026 200 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 IRX4P78413 519 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 CYP4F8P98187 520 aa6.96□□□□□ -1.3
TRIM55-203ENST00000350034 FPGSQ05932 587 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms