RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ADAM23O75077 832 aa27.29■■□□□ 1.96
SSBP4-202ENST00000348495 RNF40O75150 1001 aa27.29■■□□□ 1.96
SSBP4-202ENST00000348495 MSLNQ13421 630 aaPredicted RBP27.29■■□□□ 1.96
SSBP4-202ENST00000348495 CAMK2GQ13555 558 aaPredicted RBP27.29■■□□□ 1.96
SSBP4-202ENST00000348495 CENPUQ71F23 418 aa27.29■■□□□ 1.96
SSBP4-202ENST00000348495 RELL1Q8IUW5 271 aa27.29■■□□□ 1.96
SSBP4-202ENST00000348495 HNRNPLLQ8WVV9 542 aaKnown RBP27.29■■□□□ 1.96
SSBP4-202ENST00000348495 SHDQ96IW2 340 aa27.29■■□□□ 1.96
SSBP4-202ENST00000348495 WDR83Q9BRX9 315 aaKnown RBP27.29■■□□□ 1.96
SSBP4-202ENST00000348495 SUV39H2Q9H5I1 410 aa27.29■■□□□ 1.96
SSBP4-202ENST00000348495 LEFTY1O75610 366 aa27.28■■□□□ 1.96
SSBP4-202ENST00000348495 CHRNB1P11230 501 aa27.28■■□□□ 1.96
SSBP4-202ENST00000348495 WASP42768 502 aa27.28■■□□□ 1.96
SSBP4-202ENST00000348495 DHX9Q08211 1270 aaKnown RBP27.28■■□□□ 1.96
SSBP4-202ENST00000348495 ARMC12Q5T9G4 340 aa27.28■■□□□ 1.96
SSBP4-202ENST00000348495 GDPD4Q6W3E5 623 aa27.28■■□□□ 1.96
SSBP4-202ENST00000348495 CEP128Q6ZU80 1094 aa27.28■■□□□ 1.96
SSBP4-202ENST00000348495 TRMT11Q7Z4G4 463 aaKnown RBP27.28■■□□□ 1.96
SSBP4-202ENST00000348495 CCDC25Q86WR0 208 aa27.28■■□□□ 1.96
SSBP4-202ENST00000348495 SLC25A41Q8N5S1 370 aa27.28■■□□□ 1.96
SSBP4-202ENST00000348495 DNAAF3Q8N9W5 541 aa27.28■■□□□ 1.96
SSBP4-202ENST00000348495 GRIN3AQ8TCU5 1115 aa27.28■■□□□ 1.96
SSBP4-202ENST00000348495 OR8D1Q8WZ84 308 aa27.28■■□□□ 1.96
SSBP4-202ENST00000348495 CAVIN3Q969G5 261 aa27.28■■□□□ 1.96
SSBP4-202ENST00000348495 SIGLEC10Q96LC7 697 aa27.28■■□□□ 1.96
SSBP4-202ENST00000348495 OSBPL1AQ9BXW6 950 aa27.28■■□□□ 1.96
SSBP4-202ENST00000348495 PPM1HQ9ULR3 514 aa27.28■■□□□ 1.96
SSBP4-202ENST00000348495 PCDHB9Q9Y5E1 797 aa27.28■■□□□ 1.96
SSBP4-202ENST00000348495 BANF1O75531 89 aa27.27■■□□□ 1.96
SSBP4-202ENST00000348495 FGF1P05230 155 aa27.27■■□□□ 1.96
SSBP4-202ENST00000348495 UGT2B4P06133 528 aa27.27■■□□□ 1.96
SSBP4-202ENST00000348495 SESN2P58004 480 aaPredicted RBP27.27■■□□□ 1.96
SSBP4-202ENST00000348495 RPL26P61254 145 aaKnown RBP27.27■■□□□ 1.96
SSBP4-202ENST00000348495 PDIA2Q13087 525 aaKnown RBP27.27■■□□□ 1.96
SSBP4-202ENST00000348495 GALNT3Q14435 633 aa27.27■■□□□ 1.96
SSBP4-202ENST00000348495 MAP9Q49MG5 647 aa27.27■■□□□ 1.96
SSBP4-202ENST00000348495 ARSIQ5FYB1 569 aa27.27■■□□□ 1.96
SSBP4-202ENST00000348495 TMC3Q7Z5M5 1100 aa27.27■■□□□ 1.96
SSBP4-202ENST00000348495 PIH1D2Q8WWB5 315 aa27.27■■□□□ 1.96
SSBP4-202ENST00000348495 ADGRE3Q9BY15 652 aa27.27■■□□□ 1.96
SSBP4-202ENST00000348495 RPL26L1Q9UNX3 145 aaKnown RBP27.27■■□□□ 1.96
SSBP4-202ENST00000348495 ERLIN1O75477 346 aa27.27■■□□□ 1.96
SSBP4-202ENST00000348495 KLF8O95600 359 aaPredicted RBP27.27■■□□□ 1.96
SSBP4-202ENST00000348495 TARSP26639 723 aaKnown RBP27.27■■□□□ 1.96
SSBP4-202ENST00000348495 TNNT3P45378 269 aaPredicted RBP27.27■■□□□ 1.96
SSBP4-202ENST00000348495 NPY2RP49146 381 aa27.27■■□□□ 1.96
SSBP4-202ENST00000348495 BBS9Q3SYG4 887 aa27.27■■□□□ 1.96
SSBP4-202ENST00000348495 HSF5Q4G112 596 aaPredicted RBP27.27■■□□□ 1.96
SSBP4-202ENST00000348495 DNAJC21Q5F1R6 531 aaKnown RBP27.27■■□□□ 1.96
SSBP4-202ENST00000348495 ZSWIM9Q86XI8 627 aa27.27■■□□□ 1.96
SSBP4-202ENST00000348495 SIX5Q8N196 739 aa27.27■■□□□ 1.96
SSBP4-202ENST00000348495 TXNDC5Q8NBS9 432 aaKnown RBP27.27■■□□□ 1.96
SSBP4-202ENST00000348495 TMIEQ8NEW7 156 aa27.27■■□□□ 1.96
SSBP4-202ENST00000348495 PDCD6IPQ8WUM4 868 aaKnown RBP27.27■■□□□ 1.96
SSBP4-202ENST00000348495 LTB4R2Q9NPC1 389 aa27.27■■□□□ 1.96
SSBP4-202ENST00000348495 MRPS17Q9Y2R5 130 aaKnown RBP27.27■■□□□ 1.96
SSBP4-202ENST00000348495 TEX264Q9Y6I9 313 aa27.27■■□□□ 1.96
SSBP4-202ENST00000348495 ATG2BQ96BY7 2078 aa27.26■■□□□ 1.95
SSBP4-202ENST00000348495 MGAT1P26572 445 aa27.26■■□□□ 1.95
SSBP4-202ENST00000348495 SLMAPQ14BN4 828 aa27.26■■□□□ 1.95
SSBP4-202ENST00000348495 FASTKD3Q14CZ7 662 aaKnown RBP27.26■■□□□ 1.95
SSBP4-202ENST00000348495 CERCAMQ5T4B2 595 aa27.26■■□□□ 1.95
SSBP4-202ENST00000348495 SDE2Q6IQ49 451 aa27.26■■□□□ 1.95
SSBP4-202ENST00000348495 MPP5Q8N3R9 675 aa27.26■■□□□ 1.95
SSBP4-202ENST00000348495 LPCAT1Q8NF37 534 aa27.26■■□□□ 1.95
SSBP4-202ENST00000348495 LRRC39Q96DD0 335 aa27.26■■□□□ 1.95
SSBP4-202ENST00000348495 CD248Q9HCU0 757 aa27.26■■□□□ 1.95
SSBP4-202ENST00000348495 SAYSD1Q9NPB0 183 aa27.26■■□□□ 1.95
SSBP4-202ENST00000348495 BFARQ9NZS9 450 aa27.26■■□□□ 1.95
SSBP4-202ENST00000348495 KANSL1LA0AUZ9 987 aa27.25■■□□□ 1.95
SSBP4-202ENST00000348495 TSPAN11A1L157 253 aa27.25■■□□□ 1.95
SSBP4-202ENST00000348495 SDR42E2A6NKP2 422 aa27.25■■□□□ 1.95
SSBP4-202ENST00000348495 ANKRD66B4E2M5 251 aa27.25■■□□□ 1.95
SSBP4-202ENST00000348495 PRNPP04156 253 aa27.25■■□□□ 1.95
SSBP4-202ENST00000348495 ALADP13716 330 aa27.25■■□□□ 1.95
SSBP4-202ENST00000348495 TPH1P17752 444 aa27.25■■□□□ 1.95
SSBP4-202ENST00000348495 FZD5Q13467 585 aa27.25■■□□□ 1.95
SSBP4-202ENST00000348495 QPCTQ16769 361 aa27.25■■□□□ 1.95
SSBP4-202ENST00000348495 FBXO38Q6PIJ6 1188 aa27.25■■□□□ 1.95
SSBP4-202ENST00000348495 IGDCC3Q8IVU1 814 aa27.25■■□□□ 1.95
SSBP4-202ENST00000348495 HCAR2Q8TDS4 363 aa27.25■■□□□ 1.95
SSBP4-202ENST00000348495 KLHL32Q96NJ5 620 aa27.25■■□□□ 1.95
SSBP4-202ENST00000348495 NECAB3Q96P71 396 aaPredicted RBP27.25■■□□□ 1.95
SSBP4-202ENST00000348495 SARDHQ9UL12 918 aa27.25■■□□□ 1.95
SSBP4-202ENST00000348495 MTF2Q9Y483 593 aaPredicted RBP27.25■■□□□ 1.95
SSBP4-202ENST00000348495 A0A1W2PQF6 199 aa27.24■■□□□ 1.95
SSBP4-202ENST00000348495 ZBED8Q8IZ13 594 aa27.24■■□□□ 1.95
SSBP4-202ENST00000348495 SYNPOQ8N3V7 929 aa27.24■■□□□ 1.95
SSBP4-202ENST00000348495 RPLP0P6Q8NHW5 317 aa27.24■■□□□ 1.95
SSBP4-202ENST00000348495 IL22Q9GZX6 179 aa27.24■■□□□ 1.95
SSBP4-202ENST00000348495 SYBUQ9NX95 663 aa27.24■■□□□ 1.95
SSBP4-202ENST00000348495 DKK3Q9UBP4 350 aa27.24■■□□□ 1.95
SSBP4-202ENST00000348495 TRIOO75962 3097 aa27.24■■□□□ 1.95
SSBP4-202ENST00000348495 A0A1W2PQ67 120 aa27.24■■□□□ 1.95
SSBP4-202ENST00000348495 SYNCRIPO60506 623 aaKnown RBP27.24■■□□□ 1.95
SSBP4-202ENST00000348495 ELK3P41970 407 aa27.24■■□□□ 1.95
SSBP4-202ENST00000348495 MAGEA4P43358 317 aa27.24■■□□□ 1.95
SSBP4-202ENST00000348495 GRIA4P48058 902 aa27.24■■□□□ 1.95
SSBP4-202ENST00000348495 CRADDP78560 199 aa27.24■■□□□ 1.95
SSBP4-202ENST00000348495 ZNF805Q5CZA5 627 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms