RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 MAPK8P45983 427 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 CAV1Q03135 178 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 SLC1A5Q15758 541 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 POM121L1PQ3SYA9 428 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 LRRC8BQ6P9F7 803 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 TMEM92Q6UXU6 159 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 GDPD4Q6W3E5 623 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 PPP1R21Q6ZMI0 780 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 MPP5Q8N3R9 675 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 PDCD6IPQ8WUM4 868 aaKnown RBP19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 OR8D1Q8WZ84 308 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 ECHDC3Q96DC8 303 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 KLHL32Q96NJ5 620 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 TUBGCP5Q96RT8 1024 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 WDR83Q9BRX9 315 aaKnown RBP19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 FSD1LQ9BXM9 530 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 C2orf42Q9NWW7 574 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 GOLGA6AQ9NYA3 693 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 PPM1HQ9ULR3 514 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 PCDHB9Q9Y5E1 797 aa19.16■□□□□ 0.66
CHMP4A-201ENST00000347519 UQCRHLA0A096LP55 91 aa19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 SOCS5O75159 536 aa19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 NDST3O95803 873 aa19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 PRKCGP05129 697 aa19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 UQCRHP07919 91 aa19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 HOXB2P14652 356 aa19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 SERPINA4P29622 427 aa19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 SLC8A1P32418 973 aa19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 SESN2P58004 480 aaPredicted RBP19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 RAD51Q06609 339 aa19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 MSLNQ13421 630 aaPredicted RBP19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 ELAVL3Q14576 367 aaKnown RBP19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 QPCTQ16769 361 aa19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 HP1BP3Q5SSJ5 553 aaPredicted RBP19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 NAPEPLDQ6IQ20 393 aa19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 LPCAT1Q8NF37 534 aa19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 PIH1D2Q8WWB5 315 aa19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 ARRDC3Q96B67 414 aa19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 IFT43Q96FT9 208 aa19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 SLC6A17Q9H1V8 727 aa19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 ARNT2Q9HBZ2 717 aa19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 MRPS17Q9Y2R5 130 aaKnown RBP19.15■□□□□ 0.66
CHMP4A-201ENST00000347519 SMAPO00193 183 aa19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 NDC80O14777 642 aa19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 PDGFBP01127 241 aaPredicted RBP19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 EPOP01588 193 aa19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 PIRTP0C851 137 aa19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 MGAT1P26572 445 aa19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 COPAP53621 1224 aa19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 DHX9Q08211 1270 aaKnown RBP19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 FASTKD3Q14CZ7 662 aaKnown RBP19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 E2F5Q15329 346 aa19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 CERCAMQ5T4B2 595 aa19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 ARMC12Q5T9G4 340 aa19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 SDE2Q6IQ49 451 aa19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 TRMT11Q7Z4G4 463 aaKnown RBP19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 MMAAQ8IVH4 418 aaKnown RBP19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 EIF1ADQ8N9N8 165 aaKnown RBP19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 PIP4K2CQ8TBX8 421 aa19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 ZNF641Q96N77 438 aaPredicted RBP19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 FMO2Q99518 471 aa19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 C1QTNF1Q9BXJ1 281 aa19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 MMP17Q9ULZ9 603 aa19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 SPO11Q9Y5K1 396 aa19.14■□□□□ 0.65
CHMP4A-201ENST00000347519 PLK4O00444 970 aa19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 ALOX15BO15296 676 aa19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 SYNCRIPO60506 623 aaKnown RBP19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 PPFIA2O75334 1257 aa19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 MLNP12872 115 aa19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 CTPS1P17812 591 aa19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 PSMD8P48556 350 aa19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 CRADDP78560 199 aa19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 LRRC32Q14392 662 aa19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 HIF1AQ16665 826 aa19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 BBS9Q3SYG4 887 aa19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 UBAP2Q5T6F2 1119 aaKnown RBP19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 DENND2CQ68D51 928 aa19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 TRIM67Q6ZTA4 783 aa19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 LINC00523Q86TU6 105 aa19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 CCDC25Q86WR0 208 aa19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 CACUL1Q86Y37 369 aa19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 IGDCC3Q8IVU1 814 aa19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 DNAAF3Q8N9W5 541 aa19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 TMIEQ8NEW7 156 aa19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 SIGLEC10Q96LC7 697 aa19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 FAM129AQ9BZQ8 928 aa19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 RSPH9Q9H1X1 276 aaPredicted RBP19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 XAB2Q9HCS7 855 aaKnown RBP19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 ARIH1Q9Y4X5 557 aaPredicted RBP19.13■□□□□ 0.65
CHMP4A-201ENST00000347519 A0A0U1RQS6 177 aa19.12■□□□□ 0.65
CHMP4A-201ENST00000347519 TSPAN11A1L157 253 aa19.12■□□□□ 0.65
CHMP4A-201ENST00000347519 E7ESA3 106 aa19.12■□□□□ 0.65
CHMP4A-201ENST00000347519 KPNA3O00505 521 aaPredicted RBP19.12■□□□□ 0.65
CHMP4A-201ENST00000347519 CPP00450 1065 aa19.12■□□□□ 0.65
CHMP4A-201ENST00000347519 IL1BP01584 269 aa19.12■□□□□ 0.65
CHMP4A-201ENST00000347519 PRNPP04156 253 aa19.12■□□□□ 0.65
CHMP4A-201ENST00000347519 TIMP2P16035 220 aa19.12■□□□□ 0.65
CHMP4A-201ENST00000347519 HLA-DPA1P20036 260 aa19.12■□□□□ 0.65
CHMP4A-201ENST00000347519 ARL4CP56559 192 aa19.12■□□□□ 0.65
CHMP4A-201ENST00000347519 RPS14P62263 151 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms