RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 SOCS5O75159 536 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 LCA5LO95447 670 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 CA4P22748 312 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 CES1P23141 567 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 IL4RP24394 825 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 CCNCP24863 283 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 GARSP41250 739 aaKnown RBP15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 RXRGP48443 463 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 ARSEP51690 589 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 THOP1P52888 689 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 HADHBP55084 474 aaKnown RBP15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 FAM193AP78312 1265 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 IL9RQ01113 521 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 GALNT2Q10471 571 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 PTK2BQ14289 1009 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 NCBP2-AS2Q69YL0 99 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 BZW1Q7L1Q6 419 aaKnown RBP15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 GAS2L3Q86XJ1 694 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 PCDH19Q8TAB3 1148 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 PDCD6IPQ8WUM4 868 aaKnown RBP15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 RNF157Q96PX1 679 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 NUDCD1Q96RS6 583 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 AMACRQ9UHK6 382 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 PCOLCE2Q9UKZ9 415 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 ITM2BQ9Y287 266 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 ATP8A1Q9Y2Q0 1164 aa15.91■□□□□ 0.14
TSPAN4-201ENST00000346501 SPAARA0A1B0GVQ0 90 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 TSPAN11A1L157 253 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 H3BM21 787 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 TOR1BO14657 336 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 MFSD11O43934 449 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 LZTS3O60299 673 aaPredicted RBP15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 MMP20O60882 483 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 NDUFA10O95299 355 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 RGRP47804 291 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 CLDN2P57739 230 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 FOXC1Q12948 553 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 TFDP2Q14188 446 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 TMEM52BQ4KMG9 183 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 LRRC73Q5JTD7 316 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 PRAMEF14Q5SWL7 426 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 KYAT3Q6YP21 454 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 DBX2Q6ZNG2 339 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 Q6ZSR6 202 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 ABI3BPQ7Z7G0 1075 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 RFX6Q8HWS3 928 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 TP53INP2Q8IXH6 220 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 OR13H1Q8NG92 308 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 RAPGEF5Q92565 580 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 FAF2Q96CS3 445 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 IFT43Q96FT9 208 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 CAMK1GQ96NX5 476 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 BAG1Q99933 345 aaPredicted RBP15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 WRAP53Q9BUR4 548 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 POLR1EQ9GZS1 481 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 NT5MQ9NPB1 228 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 PCDH12Q9NPG4 1184 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 FTSJ1Q9UET6 329 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 CA5BQ9Y2D0 317 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 TTLL3Q9Y4R7 772 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 DMXL1Q9Y485 3027 aa15.9■□□□□ 0.14
TSPAN4-201ENST00000346501 CABIN1Q9Y6J0 2220 aa15.89■□□□□ 0.13
TSPAN4-201ENST00000346501 NEMP2A6NFY4 417 aa15.89■□□□□ 0.13
TSPAN4-201ENST00000346501 RIOK3O14730 519 aaKnown RBP15.89■□□□□ 0.13
TSPAN4-201ENST00000346501 PPP1R12AO14974 1030 aaPredicted RBP15.89■□□□□ 0.13
TSPAN4-201ENST00000346501 MATN3O15232 486 aa15.89■□□□□ 0.13
TSPAN4-201ENST00000346501 PSTPIP1O43586 416 aa15.89■□□□□ 0.13
TSPAN4-201ENST00000346501 BUB1BO60566 1050 aaPredicted RBP15.89■□□□□ 0.13
TSPAN4-201ENST00000346501 COMTP21964 271 aa15.89■□□□□ 0.13
TSPAN4-201ENST00000346501 EPHA8P29322 1005 aaPredicted RBP15.89■□□□□ 0.13
TSPAN4-201ENST00000346501 CDC25BP30305 580 aa15.89■□□□□ 0.13
TSPAN4-201ENST00000346501 DAAM2Q86T65 1068 aa15.89■□□□□ 0.13
TSPAN4-201ENST00000346501 KIAA1328Q86T90 577 aa15.89■□□□□ 0.13
TSPAN4-201ENST00000346501 CPNE8Q86YQ8 564 aa15.89■□□□□ 0.13
TSPAN4-201ENST00000346501 RNF25Q96BH1 459 aaPredicted RBP15.89■□□□□ 0.13
TSPAN4-201ENST00000346501 TSGA13Q96PP4 275 aa15.89■□□□□ 0.13
TSPAN4-201ENST00000346501 MGME1Q9BQP7 344 aa15.89■□□□□ 0.13
TSPAN4-201ENST00000346501 EVA1BQ9NVM1 165 aa15.89■□□□□ 0.13
TSPAN4-201ENST00000346501 KCTD5Q9NXV2 234 aa15.89■□□□□ 0.13
TSPAN4-201ENST00000346501 HEY1Q9Y5J3 304 aa15.89■□□□□ 0.13
TSPAN4-201ENST00000346501 ALG6Q9Y672 507 aa15.89■□□□□ 0.13
TSPAN4-201ENST00000346501 PCNX2A6NKB5 2137 aa15.89■□□□□ 0.13
TSPAN4-201ENST00000346501 CFAP69A5D8W1 941 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 SOWAHDA6NJG2 315 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 TNFSF14O43557 240 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 LDOC1O95751 146 aaPredicted RBP15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 CPP00450 1065 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 ELFN1P0C7U0 828 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 ALPPL2P10696 532 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 CYP2A6P11509 494 aaPredicted RBP15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 CCNB1P14635 433 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 PMLP29590 882 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 CETN2P41208 172 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 EPHB1P54762 984 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 HNRNPKP61978 463 aaKnown RBP eCLIP15.88■□□□□ 0.138e-6■■■■□ 19.7
TSPAN4-201ENST00000346501 YPEL5P62699 121 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 LRRC14Q15048 493 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 PDK1Q15118 436 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 ARMC12Q5T9G4 340 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 GCNT7Q6ZNI0 430 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms