RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 ACO1P21399 889 aaKnown RBP19.49■□□□□ 0.71
HDAC4-201ENST00000345617 BMT2Q1RMZ1 405 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 MFSD5Q6N075 450 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 PHF12Q96QT6 1004 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 ACSS3Q9H6R3 686 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 SLC28A1O00337 649 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 CYB561D2O14569 222 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 SCNN1BP51168 640 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 TBX2Q13207 712 aaPredicted RBP19.49■□□□□ 0.71
HDAC4-201ENST00000345617 SVOPLQ8N434 492 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 CCDC115Q96NT0 180 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 FNDC11Q9BVV2 318 aa19.49■□□□□ 0.71
HDAC4-201ENST00000345617 DDX3YO15523 660 aaKnown RBP19.48■□□□□ 0.71
HDAC4-201ENST00000345617 AP5Z1O43299 807 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 OR5F1O95221 314 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 DPYSL3Q14195 570 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 FSCN1Q16658 493 aaKnown RBP19.48■□□□□ 0.71
HDAC4-201ENST00000345617 PCID2Q5JVF3 399 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 AASSQ9UDR5 926 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 C17orf102A2RUQ5 167 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 HNF4AP41235 474 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 MBTD1Q05BQ5 628 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 PSMD5Q16401 504 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 GJB7Q6PEY0 223 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 MND1Q9BWT6 205 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 LRRC19Q9H756 370 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 CES1P23141 567 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 OR1E1P30953 314 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 RAB10P61026 200 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 AP1S1P61966 158 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 PTF1AQ7RTS3 328 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 SENP2Q9HC62 589 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 MNDAP41218 407 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 PTCHD4Q6ZW05 846 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 MARCH10Q8NA82 808 aaPredicted RBP19.48■□□□□ 0.71
HDAC4-201ENST00000345617 CERS2Q96G23 380 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 AKAP3O75969 853 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 THP07101 528 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 SPIBQ01892 262 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 KBTBD7Q8WVZ9 684 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 TAS2R7Q9NYW3 318 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 GPN3Q9UHW5 284 aaPredicted RBP19.48■□□□□ 0.71
HDAC4-201ENST00000345617 GNEQ9Y223 722 aaKnown RBP19.48■□□□□ 0.71
HDAC4-201ENST00000345617 SPAG17Q6Q759 2223 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 PSMD11O00231 422 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 CLK3P49761 638 aaKnown RBP19.48■□□□□ 0.71
HDAC4-201ENST00000345617 TMEM44Q2T9K0 475 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 CBWD6Q4V339 395 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 SPESP1Q6UW49 350 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 RASAL3Q86YV0 1011 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 POLR1EQ9GZS1 481 aaKnown RBP19.48■□□□□ 0.71
HDAC4-201ENST00000345617 DHX33Q9H6R0 707 aaKnown RBP19.48■□□□□ 0.71
HDAC4-201ENST00000345617 IQSEC2Q5JU85 1478 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 NUDT14O95848 222 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 FBXO47Q5MNV8 452 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 XKRXQ6PP77 449 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 ALLCQ8N6M5 410 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 FBXO30Q8TB52 745 aa19.48■□□□□ 0.71
HDAC4-201ENST00000345617 SLC30A4O14863 429 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 DRD4P21917 467 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 STOMP27105 288 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 MSANTD1Q6ZTZ1 278 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 OR2T34Q8NGX1 318 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 OR2T3Q8NH03 318 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 HTRA1Q92743 480 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 NFKBIZQ9BYH8 718 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 NPTX2P47972 431 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 USP49Q70CQ1 688 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 CST11Q9H112 138 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 SEMA6BQ9H3T3 888 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 ZMYM5Q9UJ78 669 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 IGSF6O95976 241 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 ZNF806P0C7X5 589 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 FNBP1LQ5T0N5 605 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 GPRIN3Q6ZVF9 776 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 SCAIQ8N9R8 606 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 BHMTQ93088 406 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 TSPAN4O14817 238 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 ADAMDEC1O15204 470 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 B3GAT3O94766 335 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 PTPN1P18031 435 aaKnown RBP19.47■□□□□ 0.71
HDAC4-201ENST00000345617 ATP6V0D1P61421 351 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 ADIGQ0VDE8 80 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 PGBD2Q6P3X8 592 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 GMCL1P1Q8NEA9 526 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 RIT1Q92963 219 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 SLC4A5Q9BY07 1137 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 PAK6Q9NQU5 681 aaPredicted RBP19.47■□□□□ 0.71
HDAC4-201ENST00000345617 MRPS7Q9Y2R9 242 aaKnown RBP19.47■□□□□ 0.71
HDAC4-201ENST00000345617 NUP214P35658 2090 aaPredicted RBP19.47■□□□□ 0.71
HDAC4-201ENST00000345617 OR1G1P47890 313 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 GRB10Q13322 594 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 BAATQ14032 418 aaPredicted RBP19.47■□□□□ 0.71
HDAC4-201ENST00000345617 RNF148Q8N7C7 305 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 FAM47BQ8NA70 645 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 FRMPD4Q14CM0 1322 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 ARHGEF28Q8N1W1 1705 aaKnown RBP19.47■□□□□ 0.71
HDAC4-201ENST00000345617 SLC25A12O75746 678 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 SLC22A3O75751 556 aa19.47■□□□□ 0.71
HDAC4-201ENST00000345617 FESP07332 822 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms