RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 GKP32189 559 aa13.98□□□□□ -0.17
TPM4-202ENST00000344824 LIMK1P53667 647 aa13.98□□□□□ -0.17
TPM4-202ENST00000344824 SLC20A2Q08357 652 aa13.98□□□□□ -0.17
TPM4-202ENST00000344824 CCNG2Q16589 344 aa13.98□□□□□ -0.17
TPM4-202ENST00000344824 PARP15Q460N3 678 aa13.98□□□□□ -0.17
TPM4-202ENST00000344824 ARSIQ5FYB1 569 aa13.98□□□□□ -0.17
TPM4-202ENST00000344824 FAM182AQ5T1J6 154 aa13.98□□□□□ -0.17
TPM4-202ENST00000344824 ATXN7L2Q5T6C5 722 aaPredicted RBP13.98□□□□□ -0.17
TPM4-202ENST00000344824 AGBL4Q5VU57 503 aa13.98□□□□□ -0.17
TPM4-202ENST00000344824 DARS2Q6PI48 645 aaKnown RBP13.98□□□□□ -0.17
TPM4-202ENST00000344824 CCDC137Q6PK04 289 aaKnown RBP13.98□□□□□ -0.17
TPM4-202ENST00000344824 DNASE2BQ8WZ79 361 aa13.98□□□□□ -0.17
TPM4-202ENST00000344824 EXOC2Q96KP1 924 aa13.98□□□□□ -0.17
TPM4-202ENST00000344824 HEPHQ9BQS7 1158 aa13.98□□□□□ -0.17
TPM4-202ENST00000344824 NOL6Q9H6R4 1146 aaKnown RBP13.98□□□□□ -0.17
TPM4-202ENST00000344824 AASDHPPTQ9NRN7 309 aa13.98□□□□□ -0.17
TPM4-202ENST00000344824 PPM1HQ9ULR3 514 aa13.98□□□□□ -0.17
TPM4-202ENST00000344824 ZNF148Q9UQR1 794 aa13.98□□□□□ -0.17
TPM4-202ENST00000344824 A0A1B0GVT2 93 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 ZSCAN5CA6NGD5 496 aaPredicted RBP13.97□□□□□ -0.17
TPM4-202ENST00000344824 ARHGAP42A6NI28 874 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 WASH4PA8MWX3 477 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 ARHGAP33O14559 1287 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 OPHN1O60890 802 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 CD160O95971 181 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 RBP3P10745 1247 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 CD27P26842 260 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 CSNK1EP49674 416 aaKnown RBP13.97□□□□□ -0.17
TPM4-202ENST00000344824 YBEYP58557 167 aaPredicted RBP13.97□□□□□ -0.17
TPM4-202ENST00000344824 SNRPD1P62314 119 aaKnown RBP13.97□□□□□ -0.17
TPM4-202ENST00000344824 SERINC3Q13530 473 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 TEAD4Q15561 434 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 CYP1B1Q16678 543 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 PPM1JQ5JR12 505 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 C8orf74Q6P047 294 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 GSTA5Q7RTV2 222 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 UMODL1-AS1Q8N2C9 162 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 CCNYQ8ND76 341 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 SLC6A18Q96N87 628 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 MYOCQ99972 504 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 SLC39A8Q9C0K1 460 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 LRRC19Q9H756 370 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 SP110Q9HB58 689 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 TM9SF3Q9HD45 589 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 HOMER3Q9NSC5 361 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 DONSONQ9NYP3 566 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 UBA2Q9UBT2 640 aaPredicted RBP13.97□□□□□ -0.17
TPM4-202ENST00000344824 AMACRQ9UHK6 382 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 WASF2Q9Y6W5 498 aa13.97□□□□□ -0.17
TPM4-202ENST00000344824 TDRD6O60522 2096 aaKnown RBP13.96□□□□□ -0.17
TPM4-202ENST00000344824 CABIN1Q9Y6J0 2220 aa13.96□□□□□ -0.17
TPM4-202ENST00000344824 LRRK1Q38SD2 2015 aa13.96□□□□□ -0.17
TPM4-202ENST00000344824 RNF103O00237 685 aa13.96□□□□□ -0.18
TPM4-202ENST00000344824 CDX4O14627 284 aaPredicted RBP13.96□□□□□ -0.18
TPM4-202ENST00000344824 PLRG1O43660 514 aaKnown RBP13.96□□□□□ -0.18
TPM4-202ENST00000344824 ZNF821O75541 412 aaPredicted RBP13.96□□□□□ -0.18
TPM4-202ENST00000344824 IGSF6O95976 241 aa13.96□□□□□ -0.18
TPM4-202ENST00000344824 RHOXF2BP0C7M4 288 aa13.96□□□□□ -0.18
TPM4-202ENST00000344824 NR2C2P49116 596 aa13.96□□□□□ -0.18
TPM4-202ENST00000344824 FNTAP49354 379 aa13.96□□□□□ -0.18
TPM4-202ENST00000344824 AFF3P51826 1226 aaKnown RBP13.96□□□□□ -0.18
TPM4-202ENST00000344824 AP1B1Q10567 949 aa13.96□□□□□ -0.18
TPM4-202ENST00000344824 ERN2Q76MJ5 926 aaKnown RBP13.96□□□□□ -0.18
TPM4-202ENST00000344824 ARHGAP12Q8IWW6 846 aa13.96□□□□□ -0.18
TPM4-202ENST00000344824 MMGT1Q8N4V1 131 aa13.96□□□□□ -0.18
TPM4-202ENST00000344824 TMIEQ8NEW7 156 aa13.96□□□□□ -0.18
TPM4-202ENST00000344824 OR2AP1Q8NGE2 309 aa13.96□□□□□ -0.18
TPM4-202ENST00000344824 SLC35B2Q8TB61 432 aa13.96□□□□□ -0.18
TPM4-202ENST00000344824 GDAP1L1Q96MZ0 367 aa13.96□□□□□ -0.18
TPM4-202ENST00000344824 LGMNQ99538 433 aa13.96□□□□□ -0.18
TPM4-202ENST00000344824 RHOXF2Q9BQY4 288 aa13.96□□□□□ -0.18
TPM4-202ENST00000344824 TMEM121Q9BTD3 319 aa13.96□□□□□ -0.18
TPM4-202ENST00000344824 LRRC1Q9BTT6 524 aa13.96□□□□□ -0.18
TPM4-202ENST00000344824 FRMD8P1Q9BZ68 369 aaPredicted RBP13.96□□□□□ -0.18
TPM4-202ENST00000344824 SEPT10Q9P0V9 454 aa13.96□□□□□ -0.18
TPM4-202ENST00000344824 NCOR2Q9Y618 2525 aa13.96□□□□□ -0.18
TPM4-202ENST00000344824 A0A1W2PPC4 97 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 J3KR12 359 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 PPP1R12AO14974 1030 aaPredicted RBP13.95□□□□□ -0.18
TPM4-202ENST00000344824 TTI1O43156 1089 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 SLC7A4O43246 635 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 RAD51CO43502 376 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 PCDH8O95206 1070 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 GSRP00390 522 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 UGT2B4P06133 528 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 C7P10643 843 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 RBL1P28749 1068 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 PAPOLAP51003 745 aaKnown RBP13.95□□□□□ -0.18
TPM4-202ENST00000344824 NOVA1P51513 510 aaKnown RBP13.95□□□□□ -0.18
TPM4-202ENST00000344824 NEK3P51956 506 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 NDST2P52849 883 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 C21orf59P57076 290 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 SLC7A5Q01650 507 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 DR1Q01658 176 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 CCDC15Q0P6D6 951 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 PDK1Q15118 436 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 TRIP13Q15645 432 aaPredicted RBP13.95□□□□□ -0.18
TPM4-202ENST00000344824 PIP5KL1Q5T9C9 394 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 FBXL19Q6PCT2 694 aa13.95□□□□□ -0.18
TPM4-202ENST00000344824 ARHGAP36Q6ZRI8 547 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms