RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 TRIM38O00635 465 aa14.58□□□□□ -0.08
HMGN3-202ENST00000344726 MAGEC1O60732 1142 aa14.58□□□□□ -0.08
HMGN3-202ENST00000344726 PALMO75781 387 aa14.58□□□□□ -0.08
HMGN3-202ENST00000344726 LDOC1O95751 146 aaPredicted RBP14.58□□□□□ -0.08
HMGN3-202ENST00000344726 PEX11BO96011 259 aa14.58□□□□□ -0.08
HMGN3-202ENST00000344726 ARL4AP40617 200 aa14.58□□□□□ -0.08
HMGN3-202ENST00000344726 ARSEP51690 589 aa14.58□□□□□ -0.08
HMGN3-202ENST00000344726 TAS2R40P59535 323 aa14.58□□□□□ -0.08
HMGN3-202ENST00000344726 IL10RBQ08334 325 aa14.58□□□□□ -0.08
HMGN3-202ENST00000344726 SLC10A7Q0GE19 358 aa14.58□□□□□ -0.08
HMGN3-202ENST00000344726 TBX2Q13207 712 aaPredicted RBP14.58□□□□□ -0.08
HMGN3-202ENST00000344726 CAMK2BQ13554 666 aa14.58□□□□□ -0.08
HMGN3-202ENST00000344726 SRLQ86TD4 932 aa14.58□□□□□ -0.08
HMGN3-202ENST00000344726 TTC7BQ86TV6 843 aa14.58□□□□□ -0.08
HMGN3-202ENST00000344726 CAMK1DQ8IU85 385 aa14.58□□□□□ -0.08
HMGN3-202ENST00000344726 OXR1Q8N573 874 aa14.58□□□□□ -0.08
HMGN3-202ENST00000344726 LZTR1Q8N653 840 aa14.58□□□□□ -0.08
HMGN3-202ENST00000344726 MDM1Q8TC05 714 aa14.58□□□□□ -0.08
HMGN3-202ENST00000344726 FAM71BQ8TC56 605 aa14.58□□□□□ -0.08
HMGN3-202ENST00000344726 CALN1Q9BXU9 219 aa14.58□□□□□ -0.08
HMGN3-202ENST00000344726 SP110Q9HB58 689 aa14.58□□□□□ -0.08
HMGN3-202ENST00000344726 SPTLC3Q9NUV7 552 aa14.58□□□□□ -0.08
HMGN3-202ENST00000344726 HS3ST3A1Q9Y663 406 aa14.58□□□□□ -0.08
HMGN3-202ENST00000344726 ASXL3Q9C0F0 2248 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 LRP4O75096 1905 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 TTC24A2A3L6 582 aaPredicted RBP14.57□□□□□ -0.08
HMGN3-202ENST00000344726 A6NNZ2 444 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 NEMP1O14524 444 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 MMP20O60882 483 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 PROSCO94903 275 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 H2AFZP0C0S5 128 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 DGKAP23743 735 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 GJC1P36383 396 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 CSNK1DP48730 415 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 CDH6P55285 790 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 FZD2Q14332 565 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 PROX2Q3B8N5 592 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 ZNF542PQ5EBM4 170 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 TMCO3Q6UWJ1 677 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 KYAT3Q6YP21 454 aaKnown RBP14.57□□□□□ -0.08
HMGN3-202ENST00000344726 Q6ZSR6 202 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 H2AFVQ71UI9 128 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 PTAR1Q7Z6K3 402 aaPredicted RBP14.57□□□□□ -0.08
HMGN3-202ENST00000344726 PROSER1Q86XN7 944 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 CTNNBL1Q8WYA6 563 aaPredicted RBP14.57□□□□□ -0.08
HMGN3-202ENST00000344726 LENG8Q96PV6 779 aaPredicted RBP14.57□□□□□ -0.08
HMGN3-202ENST00000344726 DEF6Q9H4E7 631 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 SUV39H2Q9H5I1 410 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 NHEJ1Q9H9Q4 299 aaPredicted RBP14.57□□□□□ -0.08
HMGN3-202ENST00000344726 KLHL11Q9NVR0 708 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 UVRAGQ9P2Y5 699 aa14.57□□□□□ -0.08
HMGN3-202ENST00000344726 PNMA8BQ9ULN7 279 aaPredicted RBP14.57□□□□□ -0.08
HMGN3-202ENST00000344726 ANKRD11Q6UB99 2663 aaPredicted RBP14.57□□□□□ -0.08
HMGN3-202ENST00000344726 SIGLEC6O43699 453 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 AKR1B10O60218 316 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 MAFKO60675 156 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 RFPL3O75679 317 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 PRKCGP05129 697 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 TMEM253P0C7T8 217 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 SSR1P43307 286 aaKnown RBP14.56□□□□□ -0.08
HMGN3-202ENST00000344726 SEMG2Q02383 582 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 SGCGQ13326 291 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 DPYSL3Q14195 570 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 KRT81Q14533 505 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 RFTN1Q14699 578 aaPredicted RBP14.56□□□□□ -0.08
HMGN3-202ENST00000344726 LBRQ14739 615 aaKnown RBP14.56□□□□□ -0.08
HMGN3-202ENST00000344726 UGP2Q16851 508 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 SARM1Q6SZW1 724 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 ZSCAN30Q86W11 494 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 PGBD5Q8N414 524 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 HCAR2Q8TDS4 363 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 ASB12Q8WXK4 309 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 CENPTQ96BT3 561 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 PSKH2Q96QS6 385 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 TUBGCP5Q96RT8 1024 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 WRAP53Q9BUR4 548 aaKnown RBP14.56□□□□□ -0.08
HMGN3-202ENST00000344726 CINPQ9BW66 212 aaPredicted RBP14.56□□□□□ -0.08
HMGN3-202ENST00000344726 PCDH12Q9NPG4 1184 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 ZNHIT6Q9NWK9 470 aaKnown RBP14.56□□□□□ -0.08
HMGN3-202ENST00000344726 KLF15Q9UIH9 416 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 DSPP15924 2871 aaKnown RBP14.56□□□□□ -0.08
HMGN3-202ENST00000344726 ZFYVE26Q68DK2 2539 aa14.56□□□□□ -0.08
HMGN3-202ENST00000344726 ITPR1Q14643 2758 aa14.55□□□□□ -0.08
HMGN3-202ENST00000344726 TRAFD1O14545 582 aaPredicted RBP14.55□□□□□ -0.08
HMGN3-202ENST00000344726 MFSD11O43934 449 aa14.55□□□□□ -0.08
HMGN3-202ENST00000344726 PIAS2O75928 621 aa14.55□□□□□ -0.08
HMGN3-202ENST00000344726 MYF5P13349 255 aa14.55□□□□□ -0.08
HMGN3-202ENST00000344726 IGFALSP35858 605 aa14.55□□□□□ -0.08
HMGN3-202ENST00000344726 NSUN2Q08J23 767 aaKnown RBP eCLIP14.55□□□□□ -0.08
HMGN3-202ENST00000344726 GRM3Q14832 879 aa14.55□□□□□ -0.08
HMGN3-202ENST00000344726 HADHQ16836 314 aaKnown RBP14.55□□□□□ -0.08
HMGN3-202ENST00000344726 TMEM52BQ4KMG9 183 aa14.55□□□□□ -0.08
HMGN3-202ENST00000344726 TMCO4Q5TGY1 634 aa14.55□□□□□ -0.08
HMGN3-202ENST00000344726 DENND6BQ8NEG7 585 aa14.55□□□□□ -0.08
HMGN3-202ENST00000344726 PCDH19Q8TAB3 1148 aa14.55□□□□□ -0.08
HMGN3-202ENST00000344726 SLC35G2Q8TBE7 412 aa14.55□□□□□ -0.08
HMGN3-202ENST00000344726 CXorf40AQ8TE69 158 aa14.55□□□□□ -0.08
HMGN3-202ENST00000344726 ECHDC3Q96DC8 303 aa14.55□□□□□ -0.08
HMGN3-202ENST00000344726 ZNF641Q96N77 438 aaPredicted RBP14.55□□□□□ -0.08
HMGN3-202ENST00000344726 ZNF599Q96NL3 588 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms