RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 RIBC2Q9H4K1 309 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 PDZD7Q9H5P4 517 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 PDHXO00330 501 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 WBP4O75554 376 aaKnown RBP10.97□□□□□ -0.65
RPL28-201ENST00000344063 SEC24AO95486 1093 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 ALOX15P16050 662 aaPredicted RBP10.97□□□□□ -0.65
RPL28-201ENST00000344063 BDNFP23560 247 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 THOP1P52888 689 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 LIMK2P53671 638 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 BNIP3Q12983 259 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 SH3D19Q5HYK7 790 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 C9orf57Q5W0N0 161 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 TTC30AQ86WT1 665 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 CENPLQ8N0S6 344 aaPredicted RBP10.97□□□□□ -0.65
RPL28-201ENST00000344063 SFRP1Q8N474 314 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 ATG16L2Q8NAA4 619 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 OR56A4Q8NGH8 313 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 GAD1Q99259 594 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 ADGRE3Q9BY15 652 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 DNAJB4Q9UDY4 337 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 PNMA8BQ9ULN7 279 aaPredicted RBP10.97□□□□□ -0.65
RPL28-201ENST00000344063 FAM32AQ9Y421 112 aaKnown RBP10.97□□□□□ -0.65
RPL28-201ENST00000344063 TELO2Q9Y4R8 837 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 MATN2O00339 956 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 RAD51BO15315 384 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 CYBBP04839 570 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 T-ENOLP0DO92 83 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 DDX5P17844 614 aaKnown RBP10.97□□□□□ -0.65
RPL28-201ENST00000344063 ADSLP30566 484 aaPredicted RBP10.97□□□□□ -0.65
RPL28-201ENST00000344063 GNA12Q03113 381 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 PWP1Q13610 501 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 ADGRE1Q14246 886 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 DGUOKQ16854 277 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 TEX44Q53QW1 395 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 PAGE2BQ5JRK9 111 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 SLC9A4Q6AI14 798 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 FRMD7Q6ZUT3 714 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 TLK2Q86UE8 772 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 ZDHHC13Q8IUH4 622 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 PHTF2Q8N3S3 785 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 HASPINQ8TF76 798 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 NRG4Q8WWG1 115 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 AZIN2Q96A70 460 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 MAGED4Q96JG8 741 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 ANAPC2Q9UJX6 822 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 MTF2Q9Y483 593 aaPredicted RBP10.97□□□□□ -0.65
RPL28-201ENST00000344063 STYXL1Q9Y6J8 313 aa10.97□□□□□ -0.65
RPL28-201ENST00000344063 SLC15A5A6NIM6 579 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 ADM5C9JUS6 153 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 SPTLC1O15269 473 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 CCNT2O60583 730 aaKnown RBP10.96□□□□□ -0.65
RPL28-201ENST00000344063 MBTD1Q05BQ5 628 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 ARMC4Q5T2S8 1044 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 BROXQ5VW32 411 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 SPPL2CQ8IUH8 684 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 ELMOD1Q8N336 334 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 DEPDC7Q96QD5 511 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 TRMOQ9BU70 441 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 COLEC11Q9BWP8 271 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 RMND5AQ9H871 391 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 EIF2B3Q9NR50 452 aaKnown RBP10.96□□□□□ -0.65
RPL28-201ENST00000344063 CCDC154A6NI56 674 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 NRP2O60462 931 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 NADKO95544 446 aaPredicted RBP10.96□□□□□ -0.65
RPL28-201ENST00000344063 AP2A1O95782 977 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 TFEBP19484 476 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 ALDH4A1P30038 563 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 CDH13P55290 713 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 LRRC74AQ0VAA2 488 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 SEMA5AQ13591 1074 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 C1orf220Q5T0J3 134 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 FAM45BPQ6NSW5 357 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 C11orf74Q86VG3 221 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 ZDHHC14Q8IZN3 488 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 FBXO27Q8NI29 283 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 FAM45AQ8TCE6 357 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 SMAD5Q99717 465 aaKnown RBP10.96□□□□□ -0.65
RPL28-201ENST00000344063 ALG9Q9H6U8 611 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 SCUBE2Q9NQ36 999 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 ARHGEF4Q9NR80 690 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 PCDHB12Q9Y5F1 795 aa10.96□□□□□ -0.65
RPL28-201ENST00000344063 ZNF541Q9H0D2 1346 aa10.96□□□□□ -0.66
RPL28-201ENST00000344063 FAM20BO75063 409 aa10.96□□□□□ -0.66
RPL28-201ENST00000344063 DDNO94850 711 aaPredicted RBP10.96□□□□□ -0.66
RPL28-201ENST00000344063 YAP1P46937 504 aaKnown RBP10.96□□□□□ -0.66
RPL28-201ENST00000344063 SLC18A2Q05940 514 aa10.96□□□□□ -0.66
RPL28-201ENST00000344063 CTBP1Q13363 440 aa10.96□□□□□ -0.66
RPL28-201ENST00000344063 CTXN3Q4LDR2 81 aa10.96□□□□□ -0.66
RPL28-201ENST00000344063 INTS6LQ5JSJ4 861 aaKnown RBP10.96□□□□□ -0.66
RPL28-201ENST00000344063 CGB2Q6NT52 195 aa10.96□□□□□ -0.66
RPL28-201ENST00000344063 NAT16Q8N8M0 369 aa10.96□□□□□ -0.66
RPL28-201ENST00000344063 UBASH3BQ8TF42 649 aa10.96□□□□□ -0.66
RPL28-201ENST00000344063 MTERF3Q96E29 417 aa10.96□□□□□ -0.66
RPL28-201ENST00000344063 PTCD3Q96EY7 689 aaKnown RBP10.96□□□□□ -0.66
RPL28-201ENST00000344063 ZNF556Q9HAH1 456 aa10.96□□□□□ -0.66
RPL28-201ENST00000344063 TUBGCP4Q9UGJ1 667 aa10.96□□□□□ -0.66
RPL28-201ENST00000344063 FARP1Q9Y4F1 1045 aaPredicted RBP10.96□□□□□ -0.66
RPL28-201ENST00000344063 SYNCRIPO60506 623 aaKnown RBP10.96□□□□□ -0.66
RPL28-201ENST00000344063 POMCP01189 267 aa10.96□□□□□ -0.66
RPL28-201ENST00000344063 DLDP09622 509 aaKnown RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms