RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 KANSL3Q9P2N6 904 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 UXTQ9UBK9 157 aaPredicted RBP12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 VWA7Q9Y334 891 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 TRPM3Q9HCF6 1732 aaPredicted RBP12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 KLF11O14901 512 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 CCNT2O60583 730 aaKnown RBP12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 VPS26AO75436 327 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 ZNF132P52740 706 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 TNFAIP8L3Q5GJ75 292 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 RAP1GAP2Q684P5 730 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 IL27RAQ6UWB1 636 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 PDSS2Q86YH6 399 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 VAT1Q99536 393 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 TRIM62Q9BVG3 475 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 CCDC106Q9BWC9 280 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 FBRSL1Q9HCM7 1045 aaKnown RBP12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 ENTPD7Q9NQZ7 604 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 DAPK2Q9UIK4 370 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 STYXL1Q9Y6J8 313 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 ZBTB14O43829 449 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 MAGP20916 626 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 NAA20P61599 178 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 PGS1Q32NB8 556 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 METTL21CQ5VZV1 264 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 PKN3Q6P5Z2 889 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 SPESP1Q6UW49 350 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 FAM35AQ86V20 835 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 P3H2Q8IVL5 708 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 CANT1Q8WVQ1 401 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 SEMA3CQ99985 751 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 BDH2Q9BUT1 245 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 BRD8Q9H0E9 1235 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 CLK4Q9HAZ1 481 aaKnown RBP12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 SMPD4Q9NXE4 827 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 URB1O60287 2271 aaKnown RBP12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 E7ENX8 843 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 ZSCAN9O15535 394 aaPredicted RBP12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 SIX3O95343 332 aaPredicted RBP12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 LBPP18428 481 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 ZBTB17Q13105 803 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 ARHGEF7Q14155 803 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 ADGRE1Q14246 886 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 CARTPTQ16568 116 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 SLC39A12Q504Y0 691 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 TAF2Q6P1X5 1199 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 KLHDC10Q6PID8 442 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 GLB1LQ6UWU2 654 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 HS6ST3Q8IZP7 471 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 C9orf16Q9BUW7 83 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 SLC2A6Q9UGQ3 507 aa12.51□□□□□ -0.41
SNRNP48-201ENST00000342415 H3BMM5 538 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 SERPINF2P08697 491 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 HSMCR30P0CW71 290 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 PTPN9P43378 593 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 EIF2B2P49770 351 aaKnown RBP12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 UBE3AQ05086 875 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 C11orf74Q86VG3 221 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 ANKLE1Q8NAG6 615 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 VPS33AQ96AX1 596 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 TBATAQ96M53 351 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 ADARB2Q9NS39 739 aaKnown RBP12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 TBC1D13Q9NVG8 400 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 DMTF1Q9Y222 760 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 MTF2Q9Y483 593 aaPredicted RBP12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 FADS3Q9Y5Q0 445 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 COPG1Q9Y678 874 aaKnown RBP12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 C2orf81A6NN90 581 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 C9IYK1 514 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 TBX4P57082 545 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 GJA9P57773 515 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 LILRA4P59901 499 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 TRIM25Q14258 630 aaKnown RBP12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 SQLEQ14534 574 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 POLD3Q15054 466 aaPredicted RBP12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 FAM43BQ6ZT52 329 aaPredicted RBP12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 CHST15Q7LFX5 561 aaPredicted RBP12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 ITFG1Q8TB96 612 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 MAPK15Q8TD08 544 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 OSBPL11Q9BXB4 747 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 PNPLA3Q9NST1 481 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 ZNHIT2Q9UHR6 403 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 ANAPC2Q9UJX6 822 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 DGKBQ9Y6T7 804 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 TP73O15350 636 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 DEAF1O75398 565 aaPredicted RBP12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 IPO13O94829 963 aaKnown RBP12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 AHSGP02765 367 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 UGT1A6P19224 532 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 ICAM3P32942 547 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 PSMD7P51665 324 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 CCNIQ14094 377 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 DDR2Q16832 855 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 LRRC8DQ7L1W4 858 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 TLK2Q86UE8 772 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 ZDHHC13Q8IUH4 622 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 LRRC52Q8N7C0 313 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 MYLPFQ96A32 169 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 HSPBAP1Q96EW2 488 aa12.5□□□□□ -0.41
SNRNP48-201ENST00000342415 FCRL3Q96P31 734 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms