RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 ISOC1Q96CN7 298 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 HGH1Q9BTY7 390 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 WDR12Q9GZL7 423 aaKnown RBP12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 USP29Q9HBJ7 922 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 KANSL3Q9P2N6 904 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 HMGXB4Q9UGU5 601 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 UBQLN1Q9UMX0 589 aaKnown RBP12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 ZNF541Q9H0D2 1346 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 H0Y858 1186 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 NCAM2O15394 837 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 ZBTB14O43829 449 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 RECQL5O94762 991 aaPredicted RBP12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 FADS2O95864 444 aaKnown RBP12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 GCAP28676 217 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 ADORA2AP29274 412 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 PCID2Q5JVF3 399 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 IL27RAQ6UWB1 636 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 TPD52L3Q96J77 140 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 PRICKLE1Q96MT3 831 aaPredicted RBP12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 ALG2Q9H553 416 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 OR12D3Q9UGF7 316 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 TRHDEQ9UKU6 1024 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 INVSQ9Y283 1065 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 CTSHP09668 335 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 PTPN1P18031 435 aaKnown RBP12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 ZNF829Q3KNS6 432 aaPredicted RBP12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 CACHD1Q5VU97 1274 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 OTOP3Q7RTS5 596 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 THEM5Q8N1Q8 247 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 SVOPQ8N4V2 548 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.6□□□□□ -0.393e-6■■□□□ 12.2
SSX2IP-201ENST00000342203 SPPL2AQ8TCT8 520 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 SENP6Q9GZR1 1112 aaPredicted RBP12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 ABCG8Q9H221 673 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 QTRT2Q9H974 415 aaKnown RBP12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 IPPQ9Y573 584 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 GMEB1Q9Y692 573 aa12.6□□□□□ -0.39
SSX2IP-201ENST00000342203 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 SH3BGRLO75368 114 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 USP17L7P0C7H9 530 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 CES1P23141 567 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 SLC7A1P30825 629 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 MAXP61244 160 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 BNIP2Q12982 314 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 GLYATQ6IB77 296 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 ZNF567Q8N184 647 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 TRIM8Q9BZR9 551 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 LHX5Q9H2C1 402 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 HIPK3Q9H422 1215 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 DTLQ9NZJ0 730 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 IFT80Q9P2H3 777 aaPredicted RBP12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 GMPPBQ9Y5P6 360 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 MYH11P35749 1972 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 CAMTA1Q9Y6Y1 1673 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 STX7O15400 261 aaKnown RBP12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 MYO1DO94832 1006 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 NMBRP28336 390 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 IL12RB1P42701 662 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 SV2CQ496J9 727 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 FOXB2Q5VYV0 432 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 IQSEC1Q6DN90 963 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 THAP5Q7Z6K1 395 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 NT5DC4Q86YG4 428 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 FAR1Q8WVX9 515 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 S100ZQ8WXG8 99 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 FEM1AQ9BSK4 669 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 SYT11Q9BT88 431 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 ZFP14Q9HCL3 533 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 IGSF9Q9P2J2 1179 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 H3BMM5 538 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 RSL1D1O76021 490 aaKnown RBP12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 TAS2R39P59534 338 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 MRPS5P82675 430 aaKnown RBP12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 LIPEQ05469 1076 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 SH3BP5LQ7L8J4 393 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 ADGRG6Q86SQ4 1221 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 TBC1D21Q8IYX1 336 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 KIAA0319LQ8IZA0 1049 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 CLYBLQ8N0X4 340 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 CCDC185Q8N715 623 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 AMER2Q8N7J2 671 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 SPATA22Q8NHS9 363 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 DMRTB1Q96MA1 342 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 RPRD1AQ96P16 312 aaPredicted RBP12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 ASB7Q9H672 318 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 PLK2Q9NYY3 685 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 SH3PXD2BA1X283 911 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 FAM159BA6NKW6 160 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 C2CD4BA6NLJ0 364 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 AZIN1O14977 448 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 TFAP2AP05549 437 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 CYP2C9P11712 490 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 RPL10P27635 214 aaKnown RBP12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 FMO4P31512 558 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 BCAP31P51572 246 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 ANKLE1Q8NAG6 615 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 SETD9Q8NE22 299 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 HM13Q8TCT9 377 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 C17orf50Q8WW18 174 aa12.59□□□□□ -0.39
SSX2IP-201ENST00000342203 BHMTQ93088 406 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms