RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 LRIT1Q9P2V4 623 aa16.55■□□□□ 0.24
NECTIN1-202ENST00000340882 TUBD1Q9UJT1 453 aa16.55■□□□□ 0.24
NECTIN1-202ENST00000340882 OR1A2Q9Y585 309 aa16.55■□□□□ 0.24
NECTIN1-202ENST00000340882 STMND1H3BQB6 276 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 TOR1BO14657 336 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 P4HA2O15460 535 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 FGF3P11487 239 aaPredicted RBP16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 TIMP2P16035 220 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 CCR10P46092 362 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 SULT1E1P49888 294 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 PEX5P50542 639 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 B4GALNT1Q00973 533 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 SLC6A3Q01959 620 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 LRRC63Q05C16 580 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 HLTFQ14527 1009 aaKnown RBP eCLIP16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 NFATC4Q14934 902 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 MYLK3Q32MK0 819 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 CCDC40Q4G0X9 1142 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 PTPN20Q4JDL3 420 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 LRRC31Q6UY01 552 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 ZNF783Q6ZMS7 281 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 PLPP6Q8IY26 295 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 C1orf131Q8NDD1 294 aaKnown RBP16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 CXorf40AQ8TE69 158 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 MIB2Q96AX9 1013 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 C1orf74Q96LT6 269 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 RBM15Q96T37 977 aaKnown RBP eCLIP16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 TBCBQ99426 244 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 APOOQ9BUR5 198 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 KCNK4Q9NYG8 393 aa16.54■□□□□ 0.24
NECTIN1-202ENST00000340882 FAM170AA1A519 330 aa16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 NKX2-8O15522 239 aa16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 MTSS1O43312 755 aa16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 DUX1O43812 170 aa16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 CD44P16070 742 aaKnown RBP16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 PNLIPP16233 465 aa16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 UGT1A3P35503 534 aa16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 RNASE9P60153 205 aaKnown RBP16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 APBA1Q02410 837 aa16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 INPP5AQ14642 412 aa16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 ARHGAP44Q17R89 818 aa16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 FOXR2Q6PJQ5 311 aa16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 FAM46DQ8NEK8 389 aa16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 OR2AP1Q8NGE2 309 aa16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 CCL4L1Q8NHW4 92 aa16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 C9orf43Q8TAL5 461 aaPredicted RBP16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 OR1E3Q8WZA6 343 aa16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 ARHGEF2Q92974 986 aaKnown RBP16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 NT5C3BQ969T7 300 aa16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 NUDT22Q9BRQ3 303 aa16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 B3GNT4Q9C0J1 378 aa16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 MRPL40Q9NQ50 206 aaKnown RBP16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 KLQ9UEF7 1012 aa16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 CENPEQ02224 2701 aa16.53■□□□□ 0.24
NECTIN1-202ENST00000340882 B4DGG1 531 aa16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 GSRP00390 522 aa16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 ATP1A2P50993 1020 aa16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 OR1D5P58170 312 aa16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 DEUP1Q05D60 604 aa16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 CETN1Q12798 172 aa16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 LRRC14Q15048 493 aa16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 MAP9Q49MG5 647 aa16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 C14orf28Q4W4Y0 310 aa16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 TRNP1Q6NT89 227 aa16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 GDPD4Q6W3E5 623 aa16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 IL22RA1Q8N6P7 574 aa16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 PLA2G15Q8NCC3 412 aa16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 ZNF397Q8NF99 534 aaPredicted RBP16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 ARHGEF26Q96DR7 871 aa16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 PGAP3Q96FM1 320 aaPredicted RBP16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 ABHD17AQ96GS6 310 aa16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 C1QTNF7Q9BXJ2 289 aa16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 ZYG11BQ9C0D3 744 aa16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 SCAND2PQ9GZW5 306 aaPredicted RBP16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 PLCB1Q9NQ66 1216 aa16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 PLEKHB1Q9UF11 243 aaPredicted RBP16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 B3GALT1Q9Y5Z6 326 aa16.52■□□□□ 0.24
NECTIN1-202ENST00000340882 IGHV5-10-1A0A0J9YXX1 117 aa16.51■□□□□ 0.23
NECTIN1-202ENST00000340882 TMEM202A6NGA9 273 aa16.51■□□□□ 0.23
NECTIN1-202ENST00000340882 TMEM110-MUSTN1A8MSY1 372 aa16.51■□□□□ 0.23
NECTIN1-202ENST00000340882 POP4O95707 220 aaKnown RBP16.51■□□□□ 0.23
NECTIN1-202ENST00000340882 TNFP01375 233 aa16.51■□□□□ 0.23
NECTIN1-202ENST00000340882 MAZP56270 477 aaKnown RBP16.51■□□□□ 0.23
NECTIN1-202ENST00000340882 ARHGEF7Q14155 803 aa16.51■□□□□ 0.23
NECTIN1-202ENST00000340882 AMZ1Q400G9 498 aa16.51■□□□□ 0.23
NECTIN1-202ENST00000340882 TMEM52BQ4KMG9 183 aa16.51■□□□□ 0.23
NECTIN1-202ENST00000340882 RAB6CQ53S08 254 aa16.51■□□□□ 0.23
NECTIN1-202ENST00000340882 TMEM164Q5U3C3 297 aa16.51■□□□□ 0.23
NECTIN1-202ENST00000340882 ISM2Q6H9L7 571 aa16.51■□□□□ 0.23
NECTIN1-202ENST00000340882 TAF8Q7Z7C8 310 aa16.51■□□□□ 0.23
NECTIN1-202ENST00000340882 IRF2BP1Q8IU81 584 aa16.51■□□□□ 0.23
NECTIN1-202ENST00000340882 CEP63Q96MT8 703 aa16.51■□□□□ 0.23
NECTIN1-202ENST00000340882 WDR92Q96MX6 357 aa16.51■□□□□ 0.23
NECTIN1-202ENST00000340882 TAAR9Q96RI9 348 aa16.51■□□□□ 0.23
NECTIN1-202ENST00000340882 OSBPL1AQ9BXW6 950 aa16.51■□□□□ 0.23
NECTIN1-202ENST00000340882 MAGEB5Q9BZ81 275 aa16.51■□□□□ 0.23
NECTIN1-202ENST00000340882 RAB6CQ9H0N0 254 aa16.51■□□□□ 0.23
NECTIN1-202ENST00000340882 TMEM168Q9H0V1 697 aa16.51■□□□□ 0.23
NECTIN1-202ENST00000340882 CDH19Q9H159 772 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms