RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 KIF19Q2TAC6 998 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 ZNF284Q2VY69 593 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 TMEM259Q4ZIN3 620 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 LRRC73Q5JTD7 316 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 KAZNQ674X7 775 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 SEL1L3Q68CR1 1132 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 IQCHQ86VS3 1027 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 FAM174AQ8TBP5 190 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 KLK6Q92876 244 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 SLC17A9Q9BYT1 436 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 GAREM1Q9H706 876 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 EBF2Q9HAK2 575 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 GDF3Q9NR23 364 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 DNAAF2Q9NVR5 837 aaKnown RBP19.37■□□□□ 0.69
SYNE4-202ENST00000340477 RBM22Q9NW64 420 aaKnown RBP eCLIP19.37■□□□□ 0.69
SYNE4-202ENST00000340477 AMFRQ9UKV5 643 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 ITM2BQ9Y287 266 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 SLCO1B1Q9Y6L6 691 aa19.37■□□□□ 0.69
SYNE4-202ENST00000340477 MUSKO15146 869 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 KRT86O43790 486 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 DFNA5O60443 496 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 CST8O60676 142 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 KRT10P13645 584 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 CCNB1P14635 433 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 TIMP2P16035 220 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 KCNA4P22459 653 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 COPS2P61201 443 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 PPIDQ08752 370 aaKnown RBP19.36■□□□□ 0.69
SYNE4-202ENST00000340477 AP1B1Q10567 949 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 SLC14A1Q13336 389 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 UGP2Q16851 508 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 HLA-BQ31612 363 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 CCDC181Q5TID7 509 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 LAYNQ6UX15 382 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 PEX26Q7Z412 305 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 TEX26Q8N6G2 289 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 UBL4BQ8N7F7 174 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 MFSD2AQ8NA29 543 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 PDCD6IPQ8WUM4 868 aaKnown RBP19.36■□□□□ 0.69
SYNE4-202ENST00000340477 MAML1Q92585 1016 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 MYOCQ99972 504 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 ZFR2Q9UPR6 939 aaKnown RBP19.36■□□□□ 0.69
SYNE4-202ENST00000340477 ATP8A1Q9Y2Q0 1164 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 SNX11Q9Y5W9 270 aa19.36■□□□□ 0.69
SYNE4-202ENST00000340477 DCDC2BA2VCK2 349 aa19.35■□□□□ 0.69
SYNE4-202ENST00000340477 GRID2IPA4D2P6 1211 aa19.35■□□□□ 0.69
SYNE4-202ENST00000340477 AREL1O15033 823 aa19.35■□□□□ 0.69
SYNE4-202ENST00000340477 PTMAP06454 111 aaKnown RBP19.35■□□□□ 0.69
SYNE4-202ENST00000340477 CTNNA2P26232 953 aa19.35■□□□□ 0.69
SYNE4-202ENST00000340477 MARCKSL1P49006 195 aa19.35■□□□□ 0.69
SYNE4-202ENST00000340477 RWDD2BP57060 319 aa19.35■□□□□ 0.69
SYNE4-202ENST00000340477 MAXP61244 160 aa19.35■□□□□ 0.69
SYNE4-202ENST00000340477 PPP2R5EQ16537 467 aa19.35■□□□□ 0.69
SYNE4-202ENST00000340477 NDUFAF2Q8N183 169 aa19.35■□□□□ 0.69
SYNE4-202ENST00000340477 OXR1Q8N573 874 aa19.35■□□□□ 0.69
SYNE4-202ENST00000340477 RNF10Q8N5U6 811 aaKnown RBP19.35■□□□□ 0.69
SYNE4-202ENST00000340477 OR2I1PQ8NGU4 316 aa19.35■□□□□ 0.69
SYNE4-202ENST00000340477 P3H4Q92791 437 aa19.35■□□□□ 0.69
SYNE4-202ENST00000340477 LGMNQ99538 433 aa19.35■□□□□ 0.69
SYNE4-202ENST00000340477 SEMA3CQ99985 751 aa19.35■□□□□ 0.69
SYNE4-202ENST00000340477 SLC32A1Q9H598 525 aa19.35■□□□□ 0.69
SYNE4-202ENST00000340477 PCDH12Q9NPG4 1184 aa19.35■□□□□ 0.69
SYNE4-202ENST00000340477 GGT7Q9UJ14 662 aa19.35■□□□□ 0.69
SYNE4-202ENST00000340477 PCDHA3Q9Y5H8 950 aa19.35■□□□□ 0.69
SYNE4-202ENST00000340477 TMEM131Q92545 1883 aa19.35■□□□□ 0.69
SYNE4-202ENST00000340477 DOCK9Q9BZ29 2069 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 LAMA1P25391 3075 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 hCG_1818297A0A087WSY0 165 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 IGLON5A6NGN9 336 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 A6NNZ2 444 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 MIF4GDA9UHW6 222 aaKnown RBP19.34■□□□□ 0.69
SYNE4-202ENST00000340477 TLR4O00206 839 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 YKT6O15498 198 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 TM7SF2O76062 418 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 CPP00450 1065 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 CCDC175P0C221 793 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 ZNF883P0CG24 379 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 CR2P20023 1033 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 CTSKP43235 329 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 CCT8P50990 548 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 FAM193AP78312 1265 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 SLC10A2Q12908 348 aaPredicted RBP19.34■□□□□ 0.69
SYNE4-202ENST00000340477 SUZ12Q15022 739 aaKnown RBP19.34■□□□□ 0.69
SYNE4-202ENST00000340477 TAZQ16635 292 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 LRRC8AQ8IWT6 810 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 PGBD5Q8N414 524 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 LRRC57Q8N9N7 239 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 DENND6BQ8NEG7 585 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 ASB12Q8WXK4 309 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 KRT35Q92764 455 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 VOPP1Q96AW1 172 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 ECHDC3Q96DC8 303 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 KLHDC7BQ96G42 594 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 WRAP53Q9BUR4 548 aaKnown RBP19.34■□□□□ 0.69
SYNE4-202ENST00000340477 NOD2Q9HC29 1040 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 FZD3Q9NPG1 666 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 SEPT10Q9P0V9 454 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 ADGRG1Q9Y653 693 aa19.34■□□□□ 0.69
SYNE4-202ENST00000340477 A0A1W2PR77 199 aa19.33■□□□□ 0.68
SYNE4-202ENST00000340477 RIOK3O14730 519 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms