RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 STK19P49842 368 aaPredicted RBP21.36■■□□□ 1.01
VRK2-201ENST00000340157 NEK3P51956 506 aa21.36■■□□□ 1.01
VRK2-201ENST00000340157 SLC12A1Q13621 1099 aa21.36■■□□□ 1.01
VRK2-201ENST00000340157 SYCE2Q6PIF2 218 aa21.36■■□□□ 1.01
VRK2-201ENST00000340157 GDAP1Q8TB36 358 aa21.36■■□□□ 1.01
VRK2-201ENST00000340157 ALKBH8Q96BT7 664 aaKnown RBP21.36■■□□□ 1.01
VRK2-201ENST00000340157 ASIC4Q96FT7 647 aa21.36■■□□□ 1.01
VRK2-201ENST00000340157 APOPT1Q96IL0 206 aa21.36■■□□□ 1.01
VRK2-201ENST00000340157 ASB16Q96NS5 453 aa21.36■■□□□ 1.01
VRK2-201ENST00000340157 NKIRAS1Q9NYS0 192 aa21.36■■□□□ 1.01
VRK2-201ENST00000340157 SPO11Q9Y5K1 396 aa21.36■■□□□ 1.01
VRK2-201ENST00000340157 TRIM24O15164 1050 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 PAPSS2O95340 614 aaPredicted RBP21.35■■□□□ 1.01
VRK2-201ENST00000340157 FSHRP23945 695 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 ABCG1P45844 678 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 TCEAL5Q5H9L2 206 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 TMEM184AQ6ZMB5 413 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 CDHR3Q6ZTQ4 885 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 GPR149Q86SP6 731 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 BLOC1S5Q8TDH9 187 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 TCP10LQ8TDR4 215 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 VOPP1Q96AW1 172 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 SGSM3Q96HU1 749 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 RPL10LQ96L21 214 aaKnown RBP21.35■■□□□ 1.01
VRK2-201ENST00000340157 ZNF317Q96PQ6 595 aaPredicted RBP21.35■■□□□ 1.01
VRK2-201ENST00000340157 SLC17A7Q9P2U7 560 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 GGA2Q9UJY4 613 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 ARIH1Q9Y4X5 557 aaPredicted RBP21.35■■□□□ 1.01
VRK2-201ENST00000340157 ARL5AQ9Y689 179 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 SIN3BO75182 1162 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 ALADP13716 330 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 GABRB3P28472 473 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 BMP8BP34820 402 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 ARSDP51689 593 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 DGKKQ5KSL6 1271 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 GRTP1Q5TC63 336 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 TRIM68Q6AZZ1 485 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 SRLQ86TD4 932 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 DENND6AQ8IWF6 608 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 TDHQ8IZJ6 230 aa21.35■■□□□ 1.01
VRK2-201ENST00000340157 ST13P5Q8NFI4 369 aaPredicted RBP21.35■■□□□ 1.01
VRK2-201ENST00000340157 CCL22O00626 93 aa21.34■■□□□ 1.01
VRK2-201ENST00000340157 PABPC1P11940 636 aaKnown RBP21.34■■□□□ 1.01
VRK2-201ENST00000340157 SRCP12931 536 aa21.34■■□□□ 1.01
VRK2-201ENST00000340157 LIMK2P53671 638 aa21.34■■□□□ 1.01
VRK2-201ENST00000340157 PTPRCAPQ14761 206 aa21.34■■□□□ 1.01
VRK2-201ENST00000340157 EML3Q32P44 896 aa21.34■■□□□ 1.01
VRK2-201ENST00000340157 OR6K2Q8NGY2 324 aa21.34■■□□□ 1.01
VRK2-201ENST00000340157 CKAP2Q8WWK9 683 aa21.34■■□□□ 1.01
VRK2-201ENST00000340157 ATXN7L3BQ96GX2 97 aa21.34■■□□□ 1.01
VRK2-201ENST00000340157 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.34■■□□□ 1.01
VRK2-201ENST00000340157 HS3ST2Q9Y278 367 aa21.34■■□□□ 1.01
VRK2-201ENST00000340157 COL4A3Q01955 1670 aa21.34■■□□□ 1.01
VRK2-201ENST00000340157 GMNCA6NCL1 334 aa21.33■■□□□ 1.01
VRK2-201ENST00000340157 SLC9A3R1O14745 358 aaPredicted RBP21.33■■□□□ 1.01
VRK2-201ENST00000340157 AURKAO14965 403 aa21.33■■□□□ 1.01
VRK2-201ENST00000340157 FZD6O60353 706 aa21.33■■□□□ 1.01
VRK2-201ENST00000340157 CYP17A1P05093 508 aa21.33■■□□□ 1.01
VRK2-201ENST00000340157 GBP2P32456 591 aaPredicted RBP21.33■■□□□ 1.01
VRK2-201ENST00000340157 ACVR1Q04771 509 aa21.33■■□□□ 1.01
VRK2-201ENST00000340157 DHCR24Q15392 516 aa21.33■■□□□ 1.01
VRK2-201ENST00000340157 TMEM215Q68D42 235 aa21.33■■□□□ 1.01
VRK2-201ENST00000340157 FSTL4Q6MZW2 842 aa21.33■■□□□ 1.01
VRK2-201ENST00000340157 GET4Q7L5D6 327 aaPredicted RBP21.33■■□□□ 1.01
VRK2-201ENST00000340157 KIAA0907Q7Z7F0 614 aaPredicted RBP21.33■■□□□ 1.01
VRK2-201ENST00000340157 ADIPOR2Q86V24 386 aa21.33■■□□□ 1.01
VRK2-201ENST00000340157 EFHBQ8N7U6 833 aa21.33■■□□□ 1.01
VRK2-201ENST00000340157 NAT16Q8N8M0 369 aa21.33■■□□□ 1.01
VRK2-201ENST00000340157 ACVR1CQ8NER5 493 aa21.33■■□□□ 1.01
VRK2-201ENST00000340157 LPCAT1Q8NF37 534 aa21.33■■□□□ 1.01
VRK2-201ENST00000340157 BRSK1Q8TDC3 778 aa21.33■■□□□ 1.01
VRK2-201ENST00000340157 OSCP1Q8WVF1 389 aa21.33■■□□□ 1.01
VRK2-201ENST00000340157 NSUN3Q9H649 340 aaKnown RBP21.33■■□□□ 1.01
VRK2-201ENST00000340157 DUS2Q9NX74 493 aaKnown RBP21.33■■□□□ 1.01
VRK2-201ENST00000340157 TXNDC16Q9P2K2 825 aa21.33■■□□□ 1.01
VRK2-201ENST00000340157 CXorf51AA0A1B0GTR3 108 aa21.32■■□□□ 1
VRK2-201ENST00000340157 TPP1O14773 563 aa21.32■■□□□ 1
VRK2-201ENST00000340157 BUD23O43709 281 aaKnown RBP21.32■■□□□ 1
VRK2-201ENST00000340157 ZWINTO95229 277 aa21.32■■□□□ 1
VRK2-201ENST00000340157 TOP3BO95985 862 aaKnown RBP21.32■■□□□ 1
VRK2-201ENST00000340157 SLC1A2P43004 574 aa21.32■■□□□ 1
VRK2-201ENST00000340157 MPP1Q00013 466 aa21.32■■□□□ 1
VRK2-201ENST00000340157 DNAJC3Q13217 504 aa21.32■■□□□ 1
VRK2-201ENST00000340157 CTBP1Q13363 440 aa21.32■■□□□ 1
VRK2-201ENST00000340157 PTPRRQ15256 657 aa21.32■■□□□ 1
VRK2-201ENST00000340157 RALGPS1Q5JS13 557 aa21.32■■□□□ 1
VRK2-201ENST00000340157 ANKRD54Q6NXT1 300 aa21.32■■□□□ 1
VRK2-201ENST00000340157 DCLK2Q8N568 766 aa21.32■■□□□ 1
VRK2-201ENST00000340157 BCAS4Q8TDM0 211 aa21.32■■□□□ 1
VRK2-201ENST00000340157 MYLIPQ8WY64 445 aa21.32■■□□□ 1
VRK2-201ENST00000340157 SMARCD2Q92925 531 aa21.32■■□□□ 1
VRK2-201ENST00000340157 ISL2Q96A47 359 aa21.32■■□□□ 1
VRK2-201ENST00000340157 TNKS2Q9H2K2 1166 aa21.32■■□□□ 1
VRK2-201ENST00000340157 PCMTD2Q9NV79 361 aa21.32■■□□□ 1
VRK2-201ENST00000340157 MKS1Q9NXB0 559 aa21.32■■□□□ 1
VRK2-201ENST00000340157 EVLQ9UI08 416 aaPredicted RBP21.32■■□□□ 1
VRK2-201ENST00000340157 MTO1Q9Y2Z2 717 aaKnown RBP21.32■■□□□ 1
VRK2-201ENST00000340157 PAMP19021 973 aa21.32■■□□□ 1
VRK2-201ENST00000340157 FCARP24071 287 aa21.32■■□□□ 1
VRK2-201ENST00000340157 GKP32189 559 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms