RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 NPAS2Q99743 824 aa14.8□□□□□ -0.04
RET-201ENST00000340058 GATA5Q9BWX5 397 aaPredicted RBP14.8□□□□□ -0.04
RET-201ENST00000340058 COPG2Q9UBF2 871 aa14.8□□□□□ -0.04
RET-201ENST00000340058 FAM32AQ9Y421 112 aaKnown RBP14.8□□□□□ -0.04
RET-201ENST00000340058 AHDC1Q5TGY3 1603 aaPredicted RBP14.8□□□□□ -0.04
RET-201ENST00000340058 FAM72CH0Y354 149 aa14.79□□□□□ -0.04
RET-201ENST00000340058 COX4I1P13073 169 aa14.79□□□□□ -0.04
RET-201ENST00000340058 MSH3P20585 1137 aa14.79□□□□□ -0.04
RET-201ENST00000340058 TACR2P21452 398 aa14.79□□□□□ -0.04
RET-201ENST00000340058 ALDH9A1P49189 494 aa14.79□□□□□ -0.04
RET-201ENST00000340058 PRIM2P49643 509 aa14.79□□□□□ -0.04
RET-201ENST00000340058 DMC1Q14565 340 aa14.79□□□□□ -0.04
RET-201ENST00000340058 FAM72AQ5TYM5 149 aa14.79□□□□□ -0.04
RET-201ENST00000340058 FAM72DQ6L9T8 149 aa14.79□□□□□ -0.04
RET-201ENST00000340058 FAM72BQ86X60 149 aa14.79□□□□□ -0.04
RET-201ENST00000340058 PNPLA1Q8N8W4 532 aa14.79□□□□□ -0.04
RET-201ENST00000340058 RBM15BQ8NDT2 890 aaKnown RBP14.79□□□□□ -0.04
RET-201ENST00000340058 OR4L1Q8NH43 312 aa14.79□□□□□ -0.04
RET-201ENST00000340058 STAG3L4Q8TBR4 150 aa14.79□□□□□ -0.04
RET-201ENST00000340058 CCSER2Q9H7U1 834 aa14.79□□□□□ -0.04
RET-201ENST00000340058 SYNDIG1Q9H7V2 258 aa14.79□□□□□ -0.04
RET-201ENST00000340058 EGFL7Q9UHF1 273 aa14.79□□□□□ -0.04
RET-201ENST00000340058 HBS1LQ9Y450 684 aaKnown RBP14.79□□□□□ -0.04
RET-201ENST00000340058 ANKRD12Q6UB98 2062 aa14.79□□□□□ -0.04
RET-201ENST00000340058 OR6C75A6NL08 312 aa14.79□□□□□ -0.04
RET-201ENST00000340058 STBD1O95210 358 aa14.79□□□□□ -0.04
RET-201ENST00000340058 PSMG1O95456 288 aa14.79□□□□□ -0.04
RET-201ENST00000340058 NELFEP18615 380 aaKnown RBP14.79□□□□□ -0.04
RET-201ENST00000340058 HNF4AP41235 474 aa14.79□□□□□ -0.04
RET-201ENST00000340058 PTDSS1P48651 473 aaKnown RBP14.79□□□□□ -0.04
RET-201ENST00000340058 SLC10A7Q0GE19 358 aa14.79□□□□□ -0.04
RET-201ENST00000340058 AP5B1Q2VPB7 878 aa14.79□□□□□ -0.04
RET-201ENST00000340058 PABPC1LQ4VXU2 614 aaKnown RBP14.79□□□□□ -0.04
RET-201ENST00000340058 C15orf39Q6ZRI6 1047 aa14.79□□□□□ -0.04
RET-201ENST00000340058 EFL1Q7Z2Z2 1120 aaKnown RBP14.79□□□□□ -0.04
RET-201ENST00000340058 OR6Y1Q8NGX8 325 aa14.79□□□□□ -0.04
RET-201ENST00000340058 MRPS23Q9Y3D9 190 aaKnown RBP14.79□□□□□ -0.04
RET-201ENST00000340058 LAMB4A4D0S4 1761 aa14.79□□□□□ -0.04
RET-201ENST00000340058 CLUHO75153 1309 aa14.79□□□□□ -0.04
RET-201ENST00000340058 H0YGN5 161 aa14.79□□□□□ -0.04
RET-201ENST00000340058 RAD51BO15315 384 aa14.79□□□□□ -0.04
RET-201ENST00000340058 PLIN3O60664 434 aa14.79□□□□□ -0.04
RET-201ENST00000340058 ATP6V1E1P36543 226 aa14.79□□□□□ -0.04
RET-201ENST00000340058 ZNF135P52742 658 aaPredicted RBP14.79□□□□□ -0.04
RET-201ENST00000340058 MAPK10P53779 464 aa14.79□□□□□ -0.04
RET-201ENST00000340058 MRPS35P82673 323 aaKnown RBP14.79□□□□□ -0.04
RET-201ENST00000340058 HTRA3P83110 453 aa14.79□□□□□ -0.04
RET-201ENST00000340058 IRF9Q00978 393 aa14.79□□□□□ -0.04
RET-201ENST00000340058 TRAF2Q12933 501 aa14.79□□□□□ -0.04
RET-201ENST00000340058 DRICH1Q6PGQ1 229 aaPredicted RBP14.79□□□□□ -0.04
RET-201ENST00000340058 NIPA2Q8N8Q9 360 aa14.79□□□□□ -0.04
RET-201ENST00000340058 CATSPER1Q8NEC5 780 aa14.79□□□□□ -0.04
RET-201ENST00000340058 BHLHE22Q8NFJ8 381 aaPredicted RBP14.79□□□□□ -0.04
RET-201ENST00000340058 TEKT5Q96M29 485 aa14.79□□□□□ -0.04
RET-201ENST00000340058 RNF145Q96MT1 663 aa14.79□□□□□ -0.04
RET-201ENST00000340058 CDK5RAP1Q96SZ6 601 aaKnown RBP14.79□□□□□ -0.04
RET-201ENST00000340058 TMEM109Q9BVC6 243 aa14.79□□□□□ -0.04
RET-201ENST00000340058 GBA3Q9H227 469 aa14.79□□□□□ -0.04
RET-201ENST00000340058 VPS45Q9NRW7 570 aa14.79□□□□□ -0.04
RET-201ENST00000340058 NFS1Q9Y697 457 aa14.79□□□□□ -0.04
RET-201ENST00000340058 PKD1L3Q7Z443 1732 aa14.79□□□□□ -0.04
RET-201ENST00000340058 MGAT4DA6NG13 374 aa14.78□□□□□ -0.04
RET-201ENST00000340058 ALBP02768 609 aa14.78□□□□□ -0.04
RET-201ENST00000340058 TYMPP19971 482 aa14.78□□□□□ -0.04
RET-201ENST00000340058 LPOP22079 712 aaPredicted RBP14.78□□□□□ -0.04
RET-201ENST00000340058 DAB2P98082 770 aa14.78□□□□□ -0.04
RET-201ENST00000340058 NRG1Q02297 640 aaPredicted RBP14.78□□□□□ -0.04
RET-201ENST00000340058 TLE2Q04725 743 aa14.78□□□□□ -0.04
RET-201ENST00000340058 CHRNB3Q05901 458 aa14.78□□□□□ -0.04
RET-201ENST00000340058 ATXN7L2Q5T6C5 722 aaPredicted RBP14.78□□□□□ -0.04
RET-201ENST00000340058 MOCOSQ96EN8 888 aa14.78□□□□□ -0.04
RET-201ENST00000340058 LINGO1Q96FE5 620 aa14.78□□□□□ -0.04
RET-201ENST00000340058 DACH2Q96NX9 599 aa14.78□□□□□ -0.04
RET-201ENST00000340058 ACAT2Q9BWD1 397 aa14.78□□□□□ -0.04
RET-201ENST00000340058 YY1AP1Q9H869 796 aa14.78□□□□□ -0.04
RET-201ENST00000340058 ASAH2Q9NR71 780 aa14.78□□□□□ -0.04
RET-201ENST00000340058 MIOSQ9NXC5 875 aa14.78□□□□□ -0.04
RET-201ENST00000340058 MYH7P12883 1935 aa14.78□□□□□ -0.04
RET-201ENST00000340058 UGT2B4P06133 528 aa14.78□□□□□ -0.04
RET-201ENST00000340058 ACADSP16219 412 aa14.78□□□□□ -0.04
RET-201ENST00000340058 HOXA11P31270 313 aaPredicted RBP14.78□□□□□ -0.04
RET-201ENST00000340058 CLCN5P51795 746 aa14.78□□□□□ -0.04
RET-201ENST00000340058 WASHC2DQ5SRD0 308 aa14.78□□□□□ -0.04
RET-201ENST00000340058 AMIGO2Q86SJ2 522 aa14.78□□□□□ -0.04
RET-201ENST00000340058 PHACTR4Q8IZ21 702 aa14.78□□□□□ -0.04
RET-201ENST00000340058 OR56A4Q8NGH8 313 aa14.78□□□□□ -0.04
RET-201ENST00000340058 ACMSDQ8TDX5 336 aa14.78□□□□□ -0.04
RET-201ENST00000340058 ING5Q8WYH8 240 aa14.78□□□□□ -0.04
RET-201ENST00000340058 RERGLQ9H628 205 aa14.78□□□□□ -0.04
RET-201ENST00000340058 PDLIM7Q9NR12 457 aa14.78□□□□□ -0.04
RET-201ENST00000340058 DNAJB4Q9UDY4 337 aa14.78□□□□□ -0.04
RET-201ENST00000340058 ZMYND8Q9ULU4 1186 aaPredicted RBP14.78□□□□□ -0.04
RET-201ENST00000340058 FCF1Q9Y324 198 aaKnown RBP14.78□□□□□ -0.04
RET-201ENST00000340058 ZFP37Q9Y6Q3 630 aaPredicted RBP14.78□□□□□ -0.04
RET-201ENST00000340058 ZNF839A8K0R7 811 aa14.78□□□□□ -0.04
RET-201ENST00000340058 J3KR12 359 aa14.78□□□□□ -0.04
RET-201ENST00000340058 CYP3A5P20815 502 aa14.78□□□□□ -0.04
RET-201ENST00000340058 POU1F1P28069 291 aa14.78□□□□□ -0.04
RET-201ENST00000340058 PTPRCAPQ14761 206 aa14.78□□□□□ -0.04
RET-201ENST00000340058 LIPMQ5VYY2 423 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms