RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 TTC9Q92623 222 aa15.82■□□□□ 0.12
LINC01116-202ENST00000339037 PRR11Q96HE9 360 aaPredicted RBP15.82■□□□□ 0.12
LINC01116-202ENST00000339037 WRAP53Q9BUR4 548 aaKnown RBP15.82■□□□□ 0.12
LINC01116-202ENST00000339037 SEMA4CQ9C0C4 833 aa15.82■□□□□ 0.12
LINC01116-202ENST00000339037 CLPBQ9H078 707 aa15.82■□□□□ 0.12
LINC01116-202ENST00000339037 NOCTQ9UK39 431 aaKnown RBP15.82■□□□□ 0.12
LINC01116-202ENST00000339037 PADI4Q9UM07 663 aa15.82■□□□□ 0.12
LINC01116-202ENST00000339037 COL27A1Q8IZC6 1860 aaPredicted RBP15.82■□□□□ 0.12
LINC01116-202ENST00000339037 TLN1Q9Y490 2541 aaKnown RBP15.82■□□□□ 0.12
LINC01116-202ENST00000339037 CCDC187A0A096LP49 1063 aa15.81■□□□□ 0.12
LINC01116-202ENST00000339037 C2CD4BA6NLJ0 364 aa15.81■□□□□ 0.12
LINC01116-202ENST00000339037 K7ENP7 123 aa15.81■□□□□ 0.12
LINC01116-202ENST00000339037 CASC3O15234 703 aaKnown RBP15.81■□□□□ 0.12
LINC01116-202ENST00000339037 BUB1O43683 1085 aa15.81■□□□□ 0.12
LINC01116-202ENST00000339037 KDELR3O43731 214 aa15.81■□□□□ 0.12
LINC01116-202ENST00000339037 ITGA2BP08514 1039 aa15.81■□□□□ 0.12
LINC01116-202ENST00000339037 PLEKP08567 350 aaPredicted RBP15.81■□□□□ 0.12
LINC01116-202ENST00000339037 C6P13671 934 aa15.81■□□□□ 0.12
LINC01116-202ENST00000339037 PTPN9P43378 593 aa15.81■□□□□ 0.12
LINC01116-202ENST00000339037 BLKP51451 505 aa15.81■□□□□ 0.12
LINC01116-202ENST00000339037 KLHL40Q2TBA0 621 aa15.81■□□□□ 0.12
LINC01116-202ENST00000339037 TCP11X2Q5H9J9 407 aa15.81■□□□□ 0.12
LINC01116-202ENST00000339037 INO80CQ6PI98 192 aaPredicted RBP15.81■□□□□ 0.12
LINC01116-202ENST00000339037 STRADAQ7RTN6 431 aa15.81■□□□□ 0.12
LINC01116-202ENST00000339037 PHLDB2Q86SQ0 1253 aa15.81■□□□□ 0.12
LINC01116-202ENST00000339037 CLEC14AQ86T13 490 aa15.81■□□□□ 0.12
LINC01116-202ENST00000339037 CCDC185Q8N715 623 aa15.81■□□□□ 0.12
LINC01116-202ENST00000339037 ARL10Q8N8L6 244 aa15.81■□□□□ 0.12
LINC01116-202ENST00000339037 SCG3Q8WXD2 468 aaKnown RBP15.81■□□□□ 0.12
LINC01116-202ENST00000339037 TTYH3Q9C0H2 523 aa15.81■□□□□ 0.12
LINC01116-202ENST00000339037 MBNL1Q9NR56 388 aaKnown RBP15.81■□□□□ 0.12
LINC01116-202ENST00000339037 DOLKQ9UPQ8 538 aa15.81■□□□□ 0.12
LINC01116-202ENST00000339037 NAV2Q8IVL1 2488 aa15.8■□□□□ 0.12
LINC01116-202ENST00000339037 IGSF6O95976 241 aa15.8■□□□□ 0.12
LINC01116-202ENST00000339037 CYP1A1P04798 512 aaPredicted RBP15.8■□□□□ 0.12
LINC01116-202ENST00000339037 EEF1GP26641 437 aaKnown RBP15.8■□□□□ 0.12
LINC01116-202ENST00000339037 ANP32AP39687 249 aaKnown RBP15.8■□□□□ 0.12
LINC01116-202ENST00000339037 HDAC4P56524 1084 aa15.8■□□□□ 0.12
LINC01116-202ENST00000339037 RHOAP61586 193 aa15.8■□□□□ 0.12
LINC01116-202ENST00000339037 CDR2Q01850 454 aa15.8■□□□□ 0.12
LINC01116-202ENST00000339037 IRF4Q15306 451 aa15.8■□□□□ 0.12
LINC01116-202ENST00000339037 ELOCQ15369 112 aa15.8■□□□□ 0.12
LINC01116-202ENST00000339037 KIAA1614Q5VZ46 1190 aa15.8■□□□□ 0.12
LINC01116-202ENST00000339037 CCDC81Q6ZN84 652 aa15.8■□□□□ 0.12
LINC01116-202ENST00000339037 FSTL5Q8N475 847 aaPredicted RBP15.8■□□□□ 0.12
LINC01116-202ENST00000339037 TP53I13Q8NBR0 393 aaPredicted RBP15.8■□□□□ 0.12
LINC01116-202ENST00000339037 PCDH19Q8TAB3 1148 aa15.8■□□□□ 0.12
LINC01116-202ENST00000339037 JOSD2Q8TAC2 188 aa15.8■□□□□ 0.12
LINC01116-202ENST00000339037 FAM172AQ8WUF8 416 aa15.8■□□□□ 0.12
LINC01116-202ENST00000339037 CASKIN2Q8WXE0 1202 aa15.8■□□□□ 0.12
LINC01116-202ENST00000339037 C11orf70Q9BRQ4 267 aa15.8■□□□□ 0.12
LINC01116-202ENST00000339037 REPIN1Q9BWE0 567 aaKnown RBP15.8■□□□□ 0.12
LINC01116-202ENST00000339037 MAGEB5Q9BZ81 275 aa15.8■□□□□ 0.12
LINC01116-202ENST00000339037 TAB2Q9NYJ8 693 aa15.8■□□□□ 0.12
LINC01116-202ENST00000339037 DKK3Q9UBP4 350 aa15.8■□□□□ 0.12
LINC01116-202ENST00000339037 MFHAS1Q9Y4C4 1052 aa15.8■□□□□ 0.12
LINC01116-202ENST00000339037 KIF26BQ2KJY2 2108 aa15.79■□□□□ 0.12
LINC01116-202ENST00000339037 GFPT2O94808 682 aa15.79■□□□□ 0.12
LINC01116-202ENST00000339037 GJB6O95452 261 aa15.79■□□□□ 0.12
LINC01116-202ENST00000339037 CELA2BP08218 269 aaPredicted RBP15.79■□□□□ 0.12
LINC01116-202ENST00000339037 ALPIP09923 528 aa15.79■□□□□ 0.12
LINC01116-202ENST00000339037 ITIH2P19823 946 aa15.79■□□□□ 0.12
LINC01116-202ENST00000339037 XPAP23025 273 aaPredicted RBP15.79■□□□□ 0.12
LINC01116-202ENST00000339037 EPHB2P29323 1055 aa15.79■□□□□ 0.12
LINC01116-202ENST00000339037 PEX5P50542 639 aa15.79■□□□□ 0.12
LINC01116-202ENST00000339037 HK3P52790 923 aa15.79■□□□□ 0.12
LINC01116-202ENST00000339037 CLN3Q13286 438 aa15.79■□□□□ 0.12
LINC01116-202ENST00000339037 LRRC14Q15048 493 aa15.79■□□□□ 0.12
LINC01116-202ENST00000339037 TCEA2Q15560 299 aa15.79■□□□□ 0.12
LINC01116-202ENST00000339037 ZSCAN23Q3MJ62 389 aa15.79■□□□□ 0.12
LINC01116-202ENST00000339037 INO80DQ53TQ3 878 aaPredicted RBP15.79■□□□□ 0.12
LINC01116-202ENST00000339037 HID1Q8IV36 788 aa15.79■□□□□ 0.12
LINC01116-202ENST00000339037 RTL3Q8N8U3 475 aaKnown RBP15.79■□□□□ 0.12
LINC01116-202ENST00000339037 KYQ8NBH2 561 aa15.79■□□□□ 0.12
LINC01116-202ENST00000339037 SLC30A5Q8TAD4 765 aa15.79■□□□□ 0.12
LINC01116-202ENST00000339037 CENPIQ92674 756 aaPredicted RBP15.79■□□□□ 0.12
LINC01116-202ENST00000339037 NTAN1Q96AB6 310 aa15.79■□□□□ 0.12
LINC01116-202ENST00000339037 MED8Q96G25 268 aa15.79■□□□□ 0.12
LINC01116-202ENST00000339037 LIN37Q96GY3 246 aaPredicted RBP15.79■□□□□ 0.12
LINC01116-202ENST00000339037 SIRPGQ9P1W8 387 aa15.79■□□□□ 0.12
LINC01116-202ENST00000339037 GULP1Q9UBP9 304 aa15.79■□□□□ 0.12
LINC01116-202ENST00000339037 ADGRG1Q9Y653 693 aa15.79■□□□□ 0.12
LINC01116-202ENST00000339037 B8ZZF3 427 aa15.78■□□□□ 0.12
LINC01116-202ENST00000339037 D6RAR5 112 aa15.78■□□□□ 0.12
LINC01116-202ENST00000339037 NTN3O00634 580 aaPredicted RBP15.78■□□□□ 0.12
LINC01116-202ENST00000339037 PLD2O14939 933 aa15.78■□□□□ 0.12
LINC01116-202ENST00000339037 RASGRP1O95267 797 aa15.78■□□□□ 0.12
LINC01116-202ENST00000339037 KRT3P12035 628 aa15.78■□□□□ 0.12
LINC01116-202ENST00000339037 CTSEP14091 401 aa15.78■□□□□ 0.12
LINC01116-202ENST00000339037 TIMP2P16035 220 aa15.78■□□□□ 0.12
LINC01116-202ENST00000339037 HTR1BP28222 390 aa15.78■□□□□ 0.12
LINC01116-202ENST00000339037 KLK7P49862 253 aa15.78■□□□□ 0.12
LINC01116-202ENST00000339037 SUOXP51687 545 aa15.78■□□□□ 0.12
LINC01116-202ENST00000339037 FMO1Q01740 532 aa15.78■□□□□ 0.12
LINC01116-202ENST00000339037 ELP6Q0PNE2 266 aa15.78■□□□□ 0.12
LINC01116-202ENST00000339037 EIF3IQ13347 325 aaKnown RBP15.78■□□□□ 0.12
LINC01116-202ENST00000339037 ALG11Q2TAA5 492 aa15.78■□□□□ 0.12
LINC01116-202ENST00000339037 CT47A1Q5JQC4 288 aaPredicted RBP15.78■□□□□ 0.12
LINC01116-202ENST00000339037 CDKAL1Q5VV42 579 aa15.78■□□□□ 0.12
LINC01116-202ENST00000339037 LVRNQ6Q4G3 990 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms