RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 SMAD1Q15797 465 aaKnown RBP15.59■□□□□ 0.09
LIMS1-202ENST00000338045 STRA8Q7Z7C7 330 aa15.59■□□□□ 0.09
LIMS1-202ENST00000338045 OR13J1Q8NGT2 312 aa15.59■□□□□ 0.09
LIMS1-202ENST00000338045 BRSK1Q8TDC3 778 aa15.59■□□□□ 0.09
LIMS1-202ENST00000338045 CKAP2Q8WWK9 683 aa15.59■□□□□ 0.09
LIMS1-202ENST00000338045 ATP2A3Q93084 1043 aa15.59■□□□□ 0.09
LIMS1-202ENST00000338045 ISL2Q96A47 359 aa15.59■□□□□ 0.09
LIMS1-202ENST00000338045 RSPRY1Q96DX4 576 aa15.59■□□□□ 0.09
LIMS1-202ENST00000338045 ZNF317Q96PQ6 595 aaPredicted RBP15.59■□□□□ 0.09
LIMS1-202ENST00000338045 IARS2Q9NSE4 1012 aaKnown RBP15.59■□□□□ 0.09
LIMS1-202ENST00000338045 RIMKLBQ9ULI2 386 aa15.59■□□□□ 0.09
LIMS1-202ENST00000338045 CHKBQ9Y259 395 aa15.59■□□□□ 0.09
LIMS1-202ENST00000338045 RAI2Q9Y5P3 530 aa15.59■□□□□ 0.09
LIMS1-202ENST00000338045 SMAD6O43541 496 aaKnown RBP15.58■□□□□ 0.08
LIMS1-202ENST00000338045 FSHRP23945 695 aa15.58■□□□□ 0.08
LIMS1-202ENST00000338045 FUT11Q495W5 492 aa15.58■□□□□ 0.08
LIMS1-202ENST00000338045 RARS2Q5T160 578 aaKnown RBP15.58■□□□□ 0.08
LIMS1-202ENST00000338045 KIAA0907Q7Z7F0 614 aaPredicted RBP15.58■□□□□ 0.08
LIMS1-202ENST00000338045 SRLQ86TD4 932 aa15.58■□□□□ 0.08
LIMS1-202ENST00000338045 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.58■□□□□ 0.08
LIMS1-202ENST00000338045 ACMSDQ8TDX5 336 aa15.58■□□□□ 0.08
LIMS1-202ENST00000338045 TIFAQ96CG3 184 aa15.58■□□□□ 0.08
LIMS1-202ENST00000338045 ASB16Q96NS5 453 aa15.58■□□□□ 0.08
LIMS1-202ENST00000338045 SLC2A11Q9BYW1 496 aa15.58■□□□□ 0.08
LIMS1-202ENST00000338045 HS3ST2Q9Y278 367 aa15.58■□□□□ 0.08
LIMS1-202ENST00000338045 MYOFQ9NZM1 2061 aa15.58■□□□□ 0.08
LIMS1-202ENST00000338045 FZD6O60353 706 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 ZNF821O75541 412 aaPredicted RBP15.57■□□□□ 0.08
LIMS1-202ENST00000338045 ALDOAP04075 364 aaKnown RBP15.57■□□□□ 0.08
LIMS1-202ENST00000338045 PABPC1P11940 636 aaKnown RBP15.57■□□□□ 0.08
LIMS1-202ENST00000338045 SPRP35270 261 aaPredicted RBP15.57■□□□□ 0.08
LIMS1-202ENST00000338045 HYAL1Q12794 435 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 TRAF2Q12933 501 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 DMC1Q14565 340 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 FAM78AQ5JUQ0 283 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 EGFL6Q8IUX8 553 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 TDHQ8IZJ6 230 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 TCP10LQ8TDR4 215 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 OSCP1Q8WVF1 389 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 FGF13Q92913 245 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 NSUN3Q9H649 340 aaKnown RBP15.57■□□□□ 0.08
LIMS1-202ENST00000338045 MLXIPLQ9NP71 852 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.57■□□□□ 0.08
LIMS1-202ENST00000338045 GGA2Q9UJY4 613 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 FBXO10Q9UK96 956 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 PCDHGC4Q9Y5F7 938 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 GOLGA8TH3BQL2 631 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 SLC7A4O43246 635 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 PDHA1P08559 390 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 PSMA3P25788 255 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 MAGEA12P43365 314 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 MAPK8P45983 427 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 ATXN7L2Q5T6C5 722 aaPredicted RBP15.57■□□□□ 0.08
LIMS1-202ENST00000338045 SYCE2Q6PIF2 218 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 EFHBQ8N7U6 833 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 BCAS4Q8TDM0 211 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 DYDC1Q8WWB3 177 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 SMARCD2Q92925 531 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 ISG20Q96AZ6 181 aaKnown RBP15.57■□□□□ 0.08
LIMS1-202ENST00000338045 CHMP6Q96FZ7 201 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 FAM167BQ9BTA0 163 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 ADGRE3Q9BY15 652 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 IGFLR1Q9H665 355 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 TRPV4Q9HBA0 871 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 GDE1Q9NZC3 331 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 GGT7Q9UJ14 662 aa15.57■□□□□ 0.08
LIMS1-202ENST00000338045 TIMM44O43615 452 aa15.56■□□□□ 0.08
LIMS1-202ENST00000338045 FAM107AO95990 144 aa15.56■□□□□ 0.08
LIMS1-202ENST00000338045 PRKCGP05129 697 aa15.56■□□□□ 0.08
LIMS1-202ENST00000338045 DHRS4L1P0CG22 281 aa15.56■□□□□ 0.08
LIMS1-202ENST00000338045 SRCP12931 536 aa15.56■□□□□ 0.08
LIMS1-202ENST00000338045 CTSOP43234 321 aaPredicted RBP15.56■□□□□ 0.08
LIMS1-202ENST00000338045 ETV4P43268 484 aa15.56■□□□□ 0.08
LIMS1-202ENST00000338045 IL9RQ01113 521 aa15.56■□□□□ 0.08
LIMS1-202ENST00000338045 SULT2A1Q06520 285 aa15.56■□□□□ 0.08
LIMS1-202ENST00000338045 DHCR24Q15392 516 aa15.56■□□□□ 0.08
LIMS1-202ENST00000338045 UGP2Q16851 508 aa15.56■□□□□ 0.08
LIMS1-202ENST00000338045 EML3Q32P44 896 aa15.56■□□□□ 0.08
LIMS1-202ENST00000338045 FSTL4Q6MZW2 842 aa15.56■□□□□ 0.08
LIMS1-202ENST00000338045 NEPROQ6NW34 567 aa15.56■□□□□ 0.08
LIMS1-202ENST00000338045 ANKRD54Q6NXT1 300 aa15.56■□□□□ 0.08
LIMS1-202ENST00000338045 ZC3HC1Q86WB0 502 aaKnown RBP15.56■□□□□ 0.08
LIMS1-202ENST00000338045 C2CD4AQ8NCU7 369 aaPredicted RBP15.56■□□□□ 0.08
LIMS1-202ENST00000338045 BLOC1S5Q8TDH9 187 aa15.56■□□□□ 0.08
LIMS1-202ENST00000338045 STYXQ8WUJ0 223 aa15.56■□□□□ 0.08
LIMS1-202ENST00000338045 MAGEB18Q96M61 343 aa15.56■□□□□ 0.08
LIMS1-202ENST00000338045 TM6SF2Q9BZW4 377 aa15.56■□□□□ 0.08
LIMS1-202ENST00000338045 RHOJQ9H4E5 214 aa15.56■□□□□ 0.08
LIMS1-202ENST00000338045 DUS2Q9NX74 493 aaKnown RBP15.56■□□□□ 0.08
LIMS1-202ENST00000338045 OBP2AQ9NY56 170 aa15.56■□□□□ 0.08
LIMS1-202ENST00000338045 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.55■□□□□ 0.08
LIMS1-202ENST00000338045 ANKRD66B4E2M5 251 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 COPEO14579 308 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 TPP1O14773 563 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 HOXC11O43248 304 aaPredicted RBP15.55■□□□□ 0.08
LIMS1-202ENST00000338045 CYP17A1P05093 508 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 GABRB3P28472 473 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 CRHR1P34998 444 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 VIPR2P41587 438 aa15.55■□□□□ 0.08
LIMS1-202ENST00000338045 ARSDP51689 593 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms