RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 FYNP06241 537 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 SLC35E2BP0CK96 405 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 ZNF792Q3KQV3 632 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 PCID2Q5JVF3 399 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 SMOQ99835 787 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 PAIP1Q9H074 479 aaKnown RBP16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 WDR6Q9NNW5 1121 aaKnown RBP16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 ZDHHC7Q9NXF8 308 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 SLCO1B7G3V0H7 640 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 FBXO21O94952 628 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 F9P00740 461 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 PAMP19021 973 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 CDC42EP1Q00587 391 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 BEX3Q00994 111 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 PKN3Q6P5Z2 889 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 MAMDC4Q6UXC1 1216 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 PGAM4Q8N0Y7 254 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 CNTD1Q8N815 330 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 BTBD9Q96Q07 612 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 MRPL46Q9H2W6 279 aaKnown RBP16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 ANKRD6Q9Y2G4 727 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 DNAJA2O60884 412 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 MYCLP1P12525 358 aaPredicted RBP16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 RPL5P46777 297 aaKnown RBP16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 PRAMEP78395 509 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 FAM83EQ2M2I3 478 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 KIF19Q2TAC6 998 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 NOMO2Q5JPE7 1267 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 AMIGO2Q86SJ2 522 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 CPNE9Q8IYJ1 553 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 TOP6BLQ8N6T0 577 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 VAT1Q99536 393 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 TINF2Q9BSI4 451 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 ABHD16BQ9H3Z7 469 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 CAAP1Q9H8G2 361 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 DNAH12Q6ZR08 3092 aa16.65■□□□□ 0.26
CDC42EP4-201ENST00000335793 PTPRFP10586 1907 aa16.64■□□□□ 0.26
CDC42EP4-201ENST00000335793 SUPT7LO94864 414 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 PSME3P61289 254 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 ADGRE1Q14246 886 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 KIAA0319Q5VV43 1072 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 OGFOD2Q6N063 350 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 ZFP1Q6P2D0 407 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 LDB1Q86U70 411 aaPredicted RBP16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 CATSPER1Q8NEC5 780 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 HEXDCQ8WVB3 486 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 RSPH1Q8WYR4 309 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 HDAC11Q96DB2 347 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 CNGB3Q9NQW8 809 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 TRPC5OSA6NMA1 111 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 CCL22O00626 93 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 TPST1O60507 370 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 FAM58BPP0C7Q3 252 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 OCM2P0CE71 109 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 OCMP0CE72 109 aaPredicted RBP16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 GABRB3P28472 473 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 HADHAP40939 763 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 AFF1P51825 1210 aaKnown RBP16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 CLEC14AQ86T13 490 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 PRICKLE1Q96MT3 831 aaPredicted RBP16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 SLC9A7Q96T83 725 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 CEP44Q9C0F1 390 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 TPK1Q9H3S4 243 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 FBXO5Q9UKT4 447 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 COQ6Q9Y2Z9 468 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 A0A1B0GTW7 788 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 C9IYK1 514 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 UBDO15205 165 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 ANXA9O76027 345 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 B3GAT3O94766 335 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 WARSP23381 471 aaKnown RBP16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 CLCNKBP51801 687 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 GJA9P57773 515 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 FASTKQ14296 549 aaKnown RBP16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 ZNF423Q2M1K9 1284 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 OGFRL1Q5TC84 451 aaPredicted RBP16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 IL23RQ5VWK5 629 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 UGT2A3Q6UWM9 527 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 ALKAL1Q6UXT8 129 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 TAC4Q86UU9 113 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 CENPLQ8N0S6 344 aaPredicted RBP16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 PABPC5Q96DU9 382 aaKnown RBP16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 RABL2AQ9UBK7 228 aaPredicted RBP16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 SFMBT1Q9UHJ3 866 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 GTF2IRD1Q9UHL9 959 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 KCNH4Q9UQ05 1017 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 AURKCQ9UQB9 309 aa16.64■□□□□ 0.25
CDC42EP4-201ENST00000335793 LTBP3Q9NS15 1303 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 CCL15-CCL14A0A0B4J2E2 113 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 PSMC3P17980 439 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 SLC1A2P43004 574 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 KPNA2P52292 529 aaKnown RBP16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 CCL15Q16663 113 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 NEPROQ6NW34 567 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 STYXQ8WUJ0 223 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 SLC2A13Q96QE2 648 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 ZBTB26Q9HCK0 441 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 RRN3Q9NYV6 651 aa16.63■□□□□ 0.25
CDC42EP4-201ENST00000335793 MPP6Q9NZW5 540 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms