RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 SLC17A7Q9P2U7 560 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 ENTPD4Q9Y227 616 aa9.87□□□□□ -0.83
COL4A6-201ENST00000334504 HDAC3O15379 428 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 LIASO43766 372 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 APOL3O95236 402 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 PSMB4P28070 264 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 HNF4AP41235 474 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 UNC5AQ6ZN44 842 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 PRR23BQ6ZRT6 265 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 KCTD8Q6ZWB6 473 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 CLHC1Q8NHS4 586 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 ZNF606Q8WXB4 792 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 ERMAPQ96PL5 475 aaPredicted RBP9.86□□□□□ -0.83
COL4A6-201ENST00000334504 FAM126AQ9BYI3 521 aaPredicted RBP9.86□□□□□ -0.83
COL4A6-201ENST00000334504 CORO2BQ9UQ03 480 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 NCK1P16333 377 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 S100A2P29034 98 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 MIPP30301 263 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 NTSP30990 170 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 RPL4P36578 427 aaKnown RBP9.86□□□□□ -0.83
COL4A6-201ENST00000334504 CCNFP41002 786 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 ALDH3A2P51648 485 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 BNIP1Q12981 228 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 GALNT3Q14435 633 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 APOBEC3FQ8IUX4 373 aaKnown RBP9.86□□□□□ -0.83
COL4A6-201ENST00000334504 SPATA6LQ8N4H0 392 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 PIK3R3Q92569 461 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 TUBGCP5Q96RT8 1024 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 FNDC11Q9BVV2 318 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 ABCG8Q9H221 673 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 CXorf21Q9HAI6 301 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 PRDM8Q9NQV8 689 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 ARL15Q9NXU5 204 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 RGS17Q9UGC6 210 aaPredicted RBP9.86□□□□□ -0.83
COL4A6-201ENST00000334504 VPS4AQ9UN37 437 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 OAS3Q9Y6K5 1087 aaKnown RBP9.86□□□□□ -0.83
COL4A6-201ENST00000334504 RPTORQ8N122 1335 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 TOR1BO14657 336 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 MID1O15344 667 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 TM7SF2O76062 418 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 HIST1H2ABP04908 130 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 KDELR1P24390 212 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 WEE1P30291 646 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 SMIM11AP58511 58 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 E2F2Q14209 437 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 PDCD4Q53EL6 469 aaKnown RBP9.86□□□□□ -0.83
COL4A6-201ENST00000334504 LIPMQ5VYY2 423 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 CXorf57Q6NSI4 855 aaKnown RBP9.86□□□□□ -0.83
COL4A6-201ENST00000334504 HIST3H2AQ7L7L0 130 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 HIST1H2ACQ93077 130 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 ZNF285Q96NJ3 590 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 TBCBQ99426 244 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 EBF3Q9H4W6 596 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 ADGRE2Q9UHX3 823 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 TSPAN16Q9UKR8 245 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 ITGA11Q9UKX5 1188 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 TNPO3Q9Y5L0 923 aaKnown RBP9.86□□□□□ -0.83
COL4A6-201ENST00000334504 PRODHO43272 600 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 DUPD1Q68J44 220 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 P2RY8Q86VZ1 359 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 TNS4Q8IZW8 715 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 HM13Q8TCT9 377 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 CHCHD6Q9BRQ6 235 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 SNX6Q9UNH7 406 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 ANKDD1BA6NHY2 528 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 HNRNPLP14866 589 aaKnown RBP eCLIP9.86□□□□□ -0.832e-6■■■■□ 21.2
COL4A6-201ENST00000334504 GLRA2P23416 452 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 ALDH4A1P30038 563 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 FSCN1Q16658 493 aaKnown RBP9.86□□□□□ -0.83
COL4A6-201ENST00000334504 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.86□□□□□ -0.83
COL4A6-201ENST00000334504 FAM171BQ6P995 826 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 RBM15BQ8NDT2 890 aaKnown RBP9.86□□□□□ -0.83
COL4A6-201ENST00000334504 STAG3L4Q8TBR4 150 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.86□□□□□ -0.83
COL4A6-201ENST00000334504 TAS2R14Q9NYV8 317 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 ZNF232Q9UNY5 417 aa9.86□□□□□ -0.83
COL4A6-201ENST00000334504 SLC28A1O00337 649 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 CCNCP24863 283 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 CTSKP43235 329 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 GJD4Q96KN9 370 aaPredicted RBP9.85□□□□□ -0.83
COL4A6-201ENST00000334504 MAGEL2Q9UJ55 1249 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 DISP1Q96F81 1524 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 PTPN1P18031 435 aaKnown RBP9.85□□□□□ -0.83
COL4A6-201ENST00000334504 SIM2Q14190 667 aaPredicted RBP9.85□□□□□ -0.83
COL4A6-201ENST00000334504 GRB14Q14449 540 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 NT5DC1Q5TFE4 455 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 OVOS1Q6IE37 1185 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 DEFB128Q7Z7B8 93 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 ATL1Q8WXF7 558 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 CERS2Q96G23 380 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 VCPIP1Q96JH7 1222 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 PPP3R2Q96LZ3 170 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 TRNT1Q96Q11 434 aaKnown RBP9.85□□□□□ -0.83
COL4A6-201ENST00000334504 CNPPD1Q9BV87 410 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 CYP3A43Q9HB55 503 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 RRAGCQ9HB90 399 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 GRHL1Q9NZI5 618 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 PEX16Q9Y5Y5 336 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 F8VP50 259 aa9.85□□□□□ -0.83
COL4A6-201ENST00000334504 RPS6KA4O75676 772 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms