RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 ARHGEF7Q14155 803 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 MAPRE2Q15555 327 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 SCARA3Q6AZY7 606 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 NPNTQ6UXI9 565 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 WDTC1Q8N5D0 677 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 CCDC185Q8N715 623 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 GFM2Q969S9 779 aaKnown RBP11.9□□□□□ -0.5
HDAC6-201ENST00000334136 ZNF570Q96NI8 536 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 CDCA3Q99618 268 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-201ENST00000334136 FAM192AQ9GZU8 254 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 TCF7L2Q9NQB0 619 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 MOSPD1Q9UJG1 213 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 FBXW11Q9UKB1 542 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 TSC22D4Q9Y3Q8 395 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 UBA6A0AVT1 1052 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-201ENST00000334136 PRR5-ARHGAP8B1AHC4 643 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 AP3B1O00203 1094 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 ALADP13716 330 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 GFAPP14136 432 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 GEMP55040 296 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 ARHGAP8P85298 464 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 PLIN5Q00G26 463 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 PTK2BQ14289 1009 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 C6orf10Q5SRN2 563 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 LPCAT4Q643R3 524 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 NAPEPLDQ6IQ20 393 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 MARK2Q7KZI7 788 aaKnown RBP11.9□□□□□ -0.5
HDAC6-201ENST00000334136 LPCAT2Q7L5N7 544 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 SUSD6Q92537 303 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 JADE3Q92613 823 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 SPATA17Q96L03 361 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 CATSPER2Q96P56 530 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 TRAPPC9Q96Q05 1148 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 SEMA6AQ9H2E6 1030 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 MFSD1Q9H3U5 465 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 TLR6Q9Y2C9 796 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 WASF2Q9Y6W5 498 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 STMN1P16949 149 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 WDR4P57081 412 aaKnown RBP11.9□□□□□ -0.5
HDAC6-201ENST00000334136 DAB2P98082 770 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 DPYSL3Q14195 570 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 FNDC3BQ53EP0 1204 aaKnown RBP11.9□□□□□ -0.5
HDAC6-201ENST00000334136 CYP2R1Q6VVX0 501 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 ZBTB49Q6ZSB9 765 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 GPRIN1Q7Z2K8 1008 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 TTC7BQ86TV6 843 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 SNX32Q86XE0 403 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 PSTKQ8IV42 348 aaKnown RBP11.9□□□□□ -0.5
HDAC6-201ENST00000334136 ULK2Q8IYT8 1036 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 HS6ST3Q8IZP7 471 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 CPA6Q8N4T0 437 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 OR6Y1Q8NGX8 325 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 HTR3CQ8WXA8 447 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 DACT3Q96B18 629 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-201ENST00000334136 ELMO2Q96JJ3 720 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 SCUBE2Q9NQ36 999 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 UBP1Q9NZI7 540 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 TMEM59LQ9UK28 342 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 HCFC2Q9Y5Z7 792 aa11.9□□□□□ -0.5
HDAC6-201ENST00000334136 SDR42E2A6NKP2 422 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 GOLGA8TH3BQL2 631 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 MTA2O94776 668 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 LRIG2O94898 1065 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 FAM58BPP0C7Q3 252 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 RBL1P28749 1068 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 L1CAMP32004 1257 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 PBX2P40425 430 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 SEL1L3Q68CR1 1132 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 BBS12Q6ZW61 710 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 STRA8Q7Z7C7 330 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 ECSITQ9BQ95 431 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 TMEM79Q9BSE2 394 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 FRMD8Q9BZ67 464 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-201ENST00000334136 PRKD2Q9BZL6 878 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 PAIP1Q9H074 479 aaKnown RBP11.89□□□□□ -0.51
HDAC6-201ENST00000334136 SEPT3Q9UH03 358 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 E9PAM4 449 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 TMCC1O94876 653 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 C1RP00736 705 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 SERPINF2P08697 491 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 FDFT1P37268 417 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 KCNQ1P51787 676 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 INPP5AQ14642 412 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 KYQ8NBH2 561 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 FAM136AQ96C01 138 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 GPR63Q9BZJ6 419 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 PIGVQ9NUD9 493 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.89□□□□□ -0.51
HDAC6-201ENST00000334136 KCNK4Q9NYG8 393 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 DCDC2Q9UHG0 476 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 AAR2Q9Y312 384 aaKnown RBP11.89□□□□□ -0.51
HDAC6-201ENST00000334136 USP12O75317 370 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 HOXB8P17481 243 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-201ENST00000334136 NELFEP18615 380 aaKnown RBP11.89□□□□□ -0.51
HDAC6-201ENST00000334136 IGFBP6P24592 240 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-201ENST00000334136 ADARP55265 1226 aaKnown RBP11.89□□□□□ -0.51
HDAC6-201ENST00000334136 GPR141Q7Z602 305 aa11.89□□□□□ -0.51
HDAC6-201ENST00000334136 RBM15BQ8NDT2 890 aaKnown RBP11.89□□□□□ -0.51
HDAC6-201ENST00000334136 PIWIL2Q8TC59 973 aaKnown RBP11.89□□□□□ -0.51
HDAC6-201ENST00000334136 OVCA2Q8WZ82 227 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms