RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 ITIH4Q14624 930 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 UPP1Q16831 310 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 KLHL35Q6PF15 583 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 B3GNT9Q6UX72 402 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 TAS1R3Q7RTX0 852 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 APTXQ7Z2E3 356 aaKnown RBP11.3□□□□□ -0.6
POLR1B-202ENST00000333990 OSTM1Q86WC4 334 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 RHOJQ9H4E5 214 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 ZNF556Q9HAH1 456 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 ZNHIT2Q9UHR6 403 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 GGT7Q9UJ14 662 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 MAFFQ9ULX9 164 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 ILVBLA1L0T0 632 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 ANKDD1BA6NHY2 528 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 HNRNPRO43390 633 aaKnown RBP11.3□□□□□ -0.6
POLR1B-202ENST00000333990 STBD1O95210 358 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 ITGBL1O95965 494 aaPredicted RBP11.3□□□□□ -0.6
POLR1B-202ENST00000333990 NUDT17P0C025 328 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 SPAM1P38567 509 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 ACSM2AQ08AH3 577 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 ACSM2BQ68CK6 577 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 KIAA0408Q6ZU52 694 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 JADE3Q92613 823 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 HGH1Q9BTY7 390 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 TDP1Q9NUW8 608 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 DTNAQ9Y4J8 743 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 SNX5Q9Y5X3 404 aa11.3□□□□□ -0.6
POLR1B-202ENST00000333990 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.29□□□□□ -0.6
POLR1B-202ENST00000333990 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.29□□□□□ -0.6
POLR1B-202ENST00000333990 RGS14O43566 566 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 IFNA14P01570 189 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 PABPC1P11940 636 aaKnown RBP11.29□□□□□ -0.6
POLR1B-202ENST00000333990 DMC1Q14565 340 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 MFSD5Q6N075 450 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 PIWIL4Q7Z3Z4 852 aaKnown RBP11.29□□□□□ -0.6
POLR1B-202ENST00000333990 OR6K2Q8NGY2 324 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 BPIFB1Q8TDL5 484 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 ASZ1Q8WWH4 475 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 OTUB2Q96DC9 234 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 TOX2Q96NM4 488 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 SYBUQ9NX95 663 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 CACNG4Q9UBN1 327 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 GLYATL1P3A0A0U1RQE8 302 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 RNASEH2AO75792 299 aaKnown RBP11.29□□□□□ -0.6
POLR1B-202ENST00000333990 MLYCDO95822 493 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 CHRNA1P02708 482 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 HNRNPA1P09651 372 aaKnown RBP eCLIP11.29□□□□□ -0.6
POLR1B-202ENST00000333990 SLC2A4P14672 509 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 NUDT2P50583 147 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 MLLT6P55198 1093 aaPredicted RBP11.29□□□□□ -0.6
POLR1B-202ENST00000333990 HTRA3P83110 453 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 IRAK1BP1Q5VVH5 260 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 LAYNQ6UX15 382 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 SRLQ86TD4 932 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 ICA1LQ8NDH6 482 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 CMASQ8NFW8 434 aaPredicted RBP11.29□□□□□ -0.6
POLR1B-202ENST00000333990 PLEKHO2Q8TD55 490 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 ATXN2LQ8WWM7 1075 aaKnown RBP11.29□□□□□ -0.6
POLR1B-202ENST00000333990 NAF1Q96HR8 494 aaKnown RBP11.29□□□□□ -0.6
POLR1B-202ENST00000333990 TRMT61BQ9BVS5 477 aaKnown RBP11.29□□□□□ -0.6
POLR1B-202ENST00000333990 SDCBP2Q9H190 292 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 VWA7Q9Y334 891 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 GPSM3Q9Y4H4 160 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 TOGARAM1Q9Y4F4 1720 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 TPP1O14773 563 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 ITGA2BP08514 1039 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 TFEBP19484 476 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 CYLC2Q14093 348 aaPredicted RBP11.29□□□□□ -0.6
POLR1B-202ENST00000333990 CRYMQ14894 314 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 TXNDC11Q6PKC3 985 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 PCDH19Q8TAB3 1148 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 PIP4K2CQ8TBX8 421 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 RDH11Q8TC12 318 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 HERVK_113Q902F9 699 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 BADQ92934 168 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 HMCESQ96FZ2 354 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 NDEL1Q9GZM8 345 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 FAM83DQ9H4H8 585 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 PSME2Q9UL46 239 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 BACE2Q9Y5Z0 518 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 NRAPQ86VF7 1730 aa11.29□□□□□ -0.6
POLR1B-202ENST00000333990 INPPL1O15357 1258 aa11.28□□□□□ -0.6
POLR1B-202ENST00000333990 CDK14O94921 469 aa11.28□□□□□ -0.6
POLR1B-202ENST00000333990 TIMP1P01033 207 aa11.28□□□□□ -0.6
POLR1B-202ENST00000333990 SYPL2Q5VXT5 272 aa11.28□□□□□ -0.6
POLR1B-202ENST00000333990 SMG8Q8ND04 991 aaKnown RBP11.28□□□□□ -0.6
POLR1B-202ENST00000333990 OR4K2Q8NGD2 314 aa11.28□□□□□ -0.6
POLR1B-202ENST00000333990 OR9Q1Q8NGQ5 310 aa11.28□□□□□ -0.6
POLR1B-202ENST00000333990 TEKT5Q96M29 485 aa11.28□□□□□ -0.6
POLR1B-202ENST00000333990 MRPL57Q9BQC6 102 aaKnown RBP11.28□□□□□ -0.6
POLR1B-202ENST00000333990 R3HDM2Q9Y2K5 976 aaKnown RBP11.28□□□□□ -0.6
POLR1B-202ENST00000333990 KCNE2Q9Y6J6 123 aa11.28□□□□□ -0.6
POLR1B-202ENST00000333990 POLD2P49005 469 aa11.28□□□□□ -0.6
POLR1B-202ENST00000333990 PLOD1Q02809 727 aaPredicted RBP11.28□□□□□ -0.6
POLR1B-202ENST00000333990 MED21Q13503 144 aa11.28□□□□□ -0.6
POLR1B-202ENST00000333990 ASTE1Q2TB18 679 aaPredicted RBP11.28□□□□□ -0.6
POLR1B-202ENST00000333990 FAM151BQ6UXP7 276 aa11.28□□□□□ -0.6
POLR1B-202ENST00000333990 ZNF280BQ86YH2 543 aa11.28□□□□□ -0.6
POLR1B-202ENST00000333990 PYROXD2Q8N2H3 581 aa11.28□□□□□ -0.6
POLR1B-202ENST00000333990 CLEC4CQ8WTT0 213 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms