RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 CRHR1P34998 444 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 NEK3P51956 506 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 IRX1P78414 480 aaPredicted RBP13.09□□□□□ -0.31
VSTM4-202ENST00000332853 UBE3AQ05086 875 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 ZNF460Q14592 562 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 GDF6Q6KF10 455 aaPredicted RBP13.09□□□□□ -0.31
VSTM4-202ENST00000332853 ZNF621Q6ZSS3 439 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 TAS1R3Q7RTX0 852 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 NECAB2Q7Z6G3 386 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 SH3GL1Q99961 368 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 H2AFY2Q9P0M6 372 aaPredicted RBP13.09□□□□□ -0.31
VSTM4-202ENST00000332853 VWA7Q9Y334 891 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 ZFP37Q9Y6Q3 630 aaPredicted RBP13.09□□□□□ -0.31
VSTM4-202ENST00000332853 MYH7P12883 1935 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 NEDD8-MDP1E9PL57 170 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 PTPN3P26045 913 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 MAD2L1Q13257 205 aaPredicted RBP13.09□□□□□ -0.31
VSTM4-202ENST00000332853 VARS2Q5ST30 1063 aaKnown RBP13.09□□□□□ -0.31
VSTM4-202ENST00000332853 VWA5B1Q5TIE3 1220 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 GPR141Q7Z602 305 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 LRRC49Q8IUZ0 686 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 ATG16L2Q8NAA4 619 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 NXNL1Q96CM4 212 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 DTLQ9NZJ0 730 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 CFAP97Q9P2B7 532 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 GCATO75600 419 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 CLK1P49759 484 aaKnown RBP13.09□□□□□ -0.31
VSTM4-202ENST00000332853 SLC16A1P53985 500 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 MAP3K10Q02779 954 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 CYP1B1Q16678 543 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 POTEHQ6S545 545 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 ZNF572Q7Z3I7 529 aaPredicted RBP13.09□□□□□ -0.31
VSTM4-202ENST00000332853 MPP5Q8N3R9 675 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 RCOR3Q9P2K3 495 aaPredicted RBP13.09□□□□□ -0.31
VSTM4-202ENST00000332853 KANSL1LA0AUZ9 987 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 NPEPPSL1A6NEC2 478 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 AP2A1O95782 977 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 SERPINA6P08185 405 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 SERPINB10P48595 397 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 FAM98BQ52LJ0 330 aaKnown RBP13.09□□□□□ -0.31
VSTM4-202ENST00000332853 FUT10Q6P4F1 479 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 SPPL2BQ8TCT7 592 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 SELENOMQ8WWX9 145 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 MCRS1Q96EZ8 462 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 PCYT2Q99447 389 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 AGAP2Q99490 1192 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 MMADHCQ9H3L0 296 aaPredicted RBP13.09□□□□□ -0.31
VSTM4-202ENST00000332853 ZDHHC18Q9NUE0 388 aa13.09□□□□□ -0.31
VSTM4-202ENST00000332853 MRPS23Q9Y3D9 190 aaKnown RBP13.09□□□□□ -0.31
VSTM4-202ENST00000332853 SRRM3A6NNA2 597 aaPredicted RBP13.08□□□□□ -0.31
VSTM4-202ENST00000332853 PMM2O15305 246 aa13.08□□□□□ -0.31
VSTM4-202ENST00000332853 L1CAMP32004 1257 aa13.08□□□□□ -0.31
VSTM4-202ENST00000332853 CTU1Q7Z7A3 348 aaKnown RBP13.08□□□□□ -0.31
VSTM4-202ENST00000332853 RCN3Q96D15 328 aa13.08□□□□□ -0.31
VSTM4-202ENST00000332853 ASB2Q96Q27 587 aa13.08□□□□□ -0.31
VSTM4-202ENST00000332853 ZNHIT2Q9UHR6 403 aa13.08□□□□□ -0.31
VSTM4-202ENST00000332853 FBXW11Q9UKB1 542 aa13.08□□□□□ -0.31
VSTM4-202ENST00000332853 C5orf60A6NFR6 353 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 CLPTM1O96005 669 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 ENPEPQ07075 957 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 ABRQ12979 859 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 PRMT9Q6P2P2 845 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 VSTM1Q6UX27 236 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 CRELD2Q6UXH1 353 aaPredicted RBP13.08□□□□□ -0.32
VSTM4-202ENST00000332853 CLEC20AQ6ZU45 233 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 IFNL1Q8IU54 200 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 SYT12Q8IV01 421 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 OR4K2Q8NGD2 314 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 M0R3G1 203 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 VPS4BO75351 444 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 TMEM63AO94886 807 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 METTL18O95568 372 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 C1RP00736 705 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 TACR2P21452 398 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 GRM3Q14832 879 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 TRMT10BQ6PF06 316 aaKnown RBP13.08□□□□□ -0.32
VSTM4-202ENST00000332853 OTOP2Q7RTS6 562 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 SPPL2AQ8TCT8 520 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 ABHD8Q96I13 439 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 RNPEPL1Q9HAU8 725 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 ITM2BQ9Y287 266 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 PEX1O43933 1283 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 WASHC5Q12768 1159 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 HECTD2Q5U5R9 776 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 OR7D4Q8NG98 312 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 SUSD6Q92537 303 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 RHOJQ9H4E5 214 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 TTC24A2A3L6 582 aaPredicted RBP13.08□□□□□ -0.32
VSTM4-202ENST00000332853 FGF1P05230 155 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 HGFP14210 728 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 ECHDC2Q86YB7 292 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 FAM9CQ8IZT9 166 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 CAPNS2Q96L46 248 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 NPAS2Q99743 824 aa13.08□□□□□ -0.32
VSTM4-202ENST00000332853 HDAC3O15379 428 aa13.07□□□□□ -0.32
VSTM4-202ENST00000332853 ALDH1A2O94788 518 aa13.07□□□□□ -0.32
VSTM4-202ENST00000332853 SNRPB2P08579 225 aaKnown RBP13.07□□□□□ -0.32
VSTM4-202ENST00000332853 ANXA5P08758 320 aa13.07□□□□□ -0.32
VSTM4-202ENST00000332853 SQLEQ14534 574 aa13.07□□□□□ -0.32
VSTM4-202ENST00000332853 ESRP1Q6NXG1 681 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms