RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 CFAP58Q5T655 872 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 C9orf64Q5T6V5 341 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 IZUMO3Q5VZ72 239 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 NCBP2-AS2Q69YL0 99 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 SLC23A3Q6PIS1 610 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 C4orf22Q6V702 233 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 RFX8Q6ZV50 586 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 ARMCX6Q7L4S7 300 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 TFAP2DQ7Z6R9 452 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 C14orf80Q86SX3 495 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 ZC3H18Q86VM9 953 aaKnown RBP9.89□□□□□ -0.83
SYN3-201ENST00000332840 CACUL1Q86Y37 369 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 RGL4Q8IZJ4 473 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 APCDD1Q8J025 514 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 ZNF366Q8N895 744 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 GANCQ8TET4 914 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 OR8D1Q8WZ84 308 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 TBC1D31Q96DN5 1066 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 ERLEC1Q96DZ1 483 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 ALG14Q96F25 216 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 FERMT1Q9BQL6 677 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 GPR174Q9BXC1 333 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 ZDHHC5Q9C0B5 715 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 SLC6A17Q9H1V8 727 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 PABPC3Q9H361 631 aaKnown RBP9.89□□□□□ -0.83
SYN3-201ENST00000332840 TMEM9BQ9NQ34 198 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 TMPRSS4Q9NRS4 437 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 FAM53CQ9NYF3 392 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 OR51B4Q9Y5P0 310 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 WDFY3Q8IZQ1 3526 aa9.89□□□□□ -0.83
SYN3-201ENST00000332840 LRRC72A6NJI9 287 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 TTC34A8MYJ7 566 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 FAM72CH0Y354 149 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 I6L893 689 aaPredicted RBP9.88□□□□□ -0.83
SYN3-201ENST00000332840 SMAPO00193 183 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 FGF10O15520 208 aaPredicted RBP9.88□□□□□ -0.83
SYN3-201ENST00000332840 SLC7A4O43246 635 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 PPFIA2O75334 1257 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 CNTN5O94779 1100 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 SEMA4FO95754 770 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 CFIP05156 583 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 ERCC2P18074 760 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 ITPKAP23677 461 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 SERPINB6P35237 376 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 RPL22P35268 128 aaKnown RBP9.88□□□□□ -0.83
SYN3-201ENST00000332840 CTSOP43234 321 aaPredicted RBP9.88□□□□□ -0.83
SYN3-201ENST00000332840 RECQLP46063 649 aaPredicted RBP9.88□□□□□ -0.83
SYN3-201ENST00000332840 GBE1Q04446 702 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 DHX9Q08211 1270 aaKnown RBP9.88□□□□□ -0.83
SYN3-201ENST00000332840 SLC10A2Q12908 348 aaPredicted RBP9.88□□□□□ -0.83
SYN3-201ENST00000332840 PDK1Q15118 436 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 P3H1Q32P28 736 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 ACCSLQ4AC99 568 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 ALFQ53S48 1182 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 SLC45A4Q5BKX6 768 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 N4BP2L1Q5TBK1 243 aaPredicted RBP9.88□□□□□ -0.83
SYN3-201ENST00000332840 STPG1Q5TH74 334 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 FAM72AQ5TYM5 149 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 MANEALQ5VSG8 457 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 FAM72DQ6L9T8 149 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 HIBCHQ6NVY1 386 aaPredicted RBP9.88□□□□□ -0.83
SYN3-201ENST00000332840 RWDD4Q6NW29 188 aaKnown RBP9.88□□□□□ -0.83
SYN3-201ENST00000332840 TMC3Q7Z5M5 1100 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 FAM72BQ86X60 149 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 SLC41A1Q8IVJ1 513 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 SH2D3CQ8N5H7 860 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 FRMD1Q8N878 549 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 ATP11CQ8NB49 1132 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 TSEN2Q8NCE0 465 aaKnown RBP9.88□□□□□ -0.83
SYN3-201ENST00000332840 DNASE2BQ8WZ79 361 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 RTP4Q96DX8 246 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 RPL10LQ96L21 214 aaKnown RBP9.88□□□□□ -0.83
SYN3-201ENST00000332840 RUFY1Q96T51 708 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 BRD8Q9H0E9 1235 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 MAGEH1Q9H213 219 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 SMOC1Q9H4F8 434 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 USP29Q9HBJ7 922 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 ATP13A1Q9HD20 1204 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 ANLNQ9NQW6 1124 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 RXFP3Q9NSD7 469 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 ETNK2Q9NVF9 386 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 TMEM248Q9NWD8 314 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 FBXL12Q9NXK8 326 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 DTLQ9NZJ0 730 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 MPP6Q9NZW5 540 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 PAK5Q9P286 719 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 VPS51Q9UID3 782 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 SLCO3A1Q9UIG8 710 aa9.88□□□□□ -0.83
SYN3-201ENST00000332840 MYO18AQ92614 2054 aaKnown RBP9.87□□□□□ -0.83
SYN3-201ENST00000332840 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.87□□□□□ -0.83
SYN3-201ENST00000332840 A0A1B0GTW7 788 aa9.87□□□□□ -0.83
SYN3-201ENST00000332840 GOLGA6BA6NDN3 693 aa9.87□□□□□ -0.83
SYN3-201ENST00000332840 METTL12A8MUP2 240 aa9.87□□□□□ -0.83
SYN3-201ENST00000332840 PPP1R12AO14974 1030 aaPredicted RBP9.87□□□□□ -0.83
SYN3-201ENST00000332840 KCNN4O15554 427 aa9.87□□□□□ -0.83
SYN3-201ENST00000332840 RAMP2O60895 175 aa9.87□□□□□ -0.83
SYN3-201ENST00000332840 LRIG2O94898 1065 aa9.87□□□□□ -0.83
SYN3-201ENST00000332840 IL1BP01584 269 aa9.87□□□□□ -0.83
SYN3-201ENST00000332840 ZSCAN5DPP0CG00 497 aa9.87□□□□□ -0.83
SYN3-201ENST00000332840 ETS1P14921 441 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms