RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 ST13P50502 369 aaKnown RBP10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 PTPN20Q4JDL3 420 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 MARK2Q7KZI7 788 aaKnown RBP10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 IQCKQ8N0W5 287 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 QRFPRQ96P65 431 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 QKIQ96PU8 341 aaKnown RBP eCLIP10.98□□□□□ -0.651e-12■■■■■ 28.1
SNRNP200-201ENST00000323853 TTYH3Q9C0H2 523 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 SPRTNQ9H040 489 aaPredicted RBP10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 ATP13A3Q9H7F0 1226 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 SF3B1O75533 1304 aaKnown RBP eCLIP10.98□□□□□ -0.652e-6■■■■■ 105.3
SNRNP200-201ENST00000323853 ANKDD1BA6NHY2 528 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 FAM155BO75949 473 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 CCNE2O96020 404 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 TNNI3P19429 210 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 MAPK8P45983 427 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 CDC42P60953 191 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 PABPC1LQ4VXU2 614 aaKnown RBP10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 TTC27Q6P3X3 843 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.98□□□□□ -0.659e-7■■■■■ 99.6
SNRNP200-201ENST00000323853 C2orf49Q9BVC5 232 aaPredicted RBP10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 PCDHGC3Q9UN70 934 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 TBC1D30Q9Y2I9 924 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 NFAT5O94916 1531 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 BBIP1A8MTZ0 92 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 UBXN8O00124 270 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 AZIN1O14977 448 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 OTCP00480 354 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 IDO1P14902 403 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 ATP6V0D1P61421 351 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 PTP4A2Q12974 167 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 PSMD5Q16401 504 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 BRMS1LQ5PSV4 323 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 ZNF57Q68EA5 555 aaPredicted RBP10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 STRADAQ7RTN6 431 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 OSBPL11Q9BXB4 747 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 CNGB3Q9NQW8 809 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 ENTPD4Q9Y227 616 aa10.98□□□□□ -0.65
SNRNP200-201ENST00000323853 TCRBV7S2A1N4TA0A589 114 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 LIN7AO14910 233 aaPredicted RBP10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 SNAP91O60641 907 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 HNRNPLP14866 589 aaKnown RBP eCLIP10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 ADSSP30520 456 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 CXorf40AQ8TE69 158 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 TCF12Q99081 682 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 CNTNAP1P78357 1384 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 PNMA8CA0A1B0GUJ8 204 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 BCLAF3A2AJT9 711 aaKnown RBP10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 FFAR3O14843 346 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 GPR42O15529 346 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 SHOX2O60902 331 aaPredicted RBP10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 CYP7B1O75881 506 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 CES1P23141 567 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 NUP62P37198 522 aaPredicted RBP10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 POLD2P49005 469 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 MAXP61244 160 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 DPYSQ14117 519 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 LCLAT1Q6UWP7 414 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 EIF3MQ7L2H7 374 aaKnown RBP10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 GATAD2AQ86YP4 633 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 NETO2Q8NC67 525 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 GRIN3AQ8TCU5 1115 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 ATL1Q8WXF7 558 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 REXO5Q96IC2 774 aaKnown RBP10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 FAM84AQ96KN4 292 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 HMG20AQ9NP66 347 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 KLHL1Q9NR64 748 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 PNPLA3Q9NST1 481 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 ST3GAL5Q9UNP4 418 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 EFR3BQ9Y2G0 817 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 PAICSP22234 425 aaKnown RBP10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 MMP8P22894 467 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 MAPK9P45984 424 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 INTS11Q5TA45 600 aaKnown RBP10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 CACTIN-AS1Q8N1I8 211 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 FNIP1Q8TF40 1166 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 VPS51Q9UID3 782 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 CENPXA8MT69 81 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 TTKP33981 857 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 PTGIRP43119 386 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 ITGA1P56199 1179 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 CERCAMQ5T4B2 595 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 TRAPPC5Q8IUR0 188 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 BPIFB6Q8NFQ5 453 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 TEKT5Q96M29 485 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 CPXM1Q96SM3 734 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 NPAS2Q99743 824 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 ZMYND8Q9ULU4 1186 aaPredicted RBP10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 NPEPPSL1A6NEC2 478 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 MOXD2PA6NHM9 499 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 A8MUI8 341 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 PRR5-ARHGAP8B1AHC4 643 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 PLSCR1O15162 318 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 VAV1P15498 845 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 CDKN2BP42772 138 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 NR1H2P55055 460 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 ARHGAP8P85298 464 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 PFKPQ01813 784 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 MAPKAPK3Q16644 382 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 INSCQ1MX18 579 aa10.97□□□□□ -0.65
SNRNP200-201ENST00000323853 ADGRD1Q6QNK2 874 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms