RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 BTG3Q14201 252 aaPredicted RBP15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 GRM3Q14832 879 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 KCTD21Q4G0X4 260 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 SPANXN3Q5MJ09 141 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 CD300LGQ6UXG3 332 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 CIR1Q86X95 450 aaPredicted RBP15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 TSPAN14Q8NG11 270 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 ZSCAN18Q8TBC5 510 aaPredicted RBP15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 TASP1Q9H6P5 420 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 EIF2B3Q9NR50 452 aaKnown RBP15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 RBM22Q9NW64 420 aaKnown RBP eCLIP15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 OSER1Q9NX31 292 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 RRN3Q9NYV6 651 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 COPG2Q9UBF2 871 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 STK39Q9UEW8 545 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 FIS1Q9Y3D6 152 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 Q9Y3F1 56 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 SH3PXD2BA1X283 911 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 STX16-NPEPL1H3BU86 382 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 RPL9P32969 192 aaKnown RBP15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 ETFBP38117 255 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 PHEXP78562 749 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 CREB5Q02930 508 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 GALNT2Q10471 571 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 USP10Q14694 798 aaKnown RBP15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 FAM219BQ5XKK7 198 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 ITPRIPL1Q6GPH6 555 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 ESRP1Q6NXG1 681 aaKnown RBP15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 NAPRTQ6XQN6 538 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 VPS39Q96JC1 886 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 RBBP8Q99708 897 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 CPNE1Q99829 537 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 CCT7Q99832 543 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 OMDQ99983 421 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 FSD1LQ9BXM9 530 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 CHST12Q9NRB3 414 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 DCDC2Q9UHG0 476 aa15.69■□□□□ 0.1
SHROOM1-201ENST00000319854 NT5C1B-RDH14C9J2C7 533 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 HSPA4LO95757 839 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 NUDT2P50583 147 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 NDST2P52849 883 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 CDH15P55291 814 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 CTBSQ01459 385 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 EFEMP1Q12805 493 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 FLOT2Q14254 428 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 PRPSAP1Q14558 356 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 SMYD5Q6GMV2 418 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 LPCAT2Q7L5N7 544 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 SLC41A1Q8IVJ1 513 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 URGCPQ8TCY9 931 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 GIPC3Q8TF64 312 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 HDAC11Q96DB2 347 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 KLHL32Q96NJ5 620 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 NAT9Q9BTE0 207 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 DNAJC28Q9NX36 388 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 PDCD11Q14690 1871 aaKnown RBP15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 CFLARO15519 480 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 SEPT4O43236 478 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 DPP6P42658 865 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 CDK9P50750 372 aaKnown RBP15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 SCAPQ12770 1279 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 TRIML2Q8N7C3 387 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 ZNF781Q8N8C0 355 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 OR52B2Q96RD2 323 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 RANBP9Q96S59 729 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 BRD8Q9H0E9 1235 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 COG4Q9H9E3 785 aa15.68■□□□□ 0.1
SHROOM1-201ENST00000319854 CHRNGP07510 517 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 CNTFP26441 200 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 FCGRTP55899 365 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 ITGA7Q13683 1181 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 CEACAM7Q14002 265 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 DCLRE1AQ6PJP8 1040 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 SCD5Q86SK9 330 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 PATL1Q86TB9 770 aaKnown RBP15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 FAM156AQ8NDB6 213 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 BHLHE22Q8NFJ8 381 aaPredicted RBP15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 RTKNQ9BST9 563 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 CASS4Q9NQ75 786 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 KANSL1LA0AUZ9 987 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 TRIM43BA6NCK2 446 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 RNASEH2AO75792 299 aaKnown RBP15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 CCR1P32246 355 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 PFKPQ01813 784 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 MGAT3Q09327 533 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 ZNF423Q2M1K9 1284 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 FAM171BQ6P995 826 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 LDB1Q86U70 411 aaPredicted RBP15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 TMEM135Q86UB9 458 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 ADCY4Q8NFM4 1077 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 KCTD4Q8WVF5 259 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 SEMA6AQ9H2E6 1030 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 PCDH10Q9P2E7 1040 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 EBF1Q9UH73 591 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 AURKAO14965 403 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 NCAM2O15394 837 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 IRAK2O43187 625 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 GATMP50440 423 aa15.67■□□□□ 0.1
SHROOM1-201ENST00000319854 GSTM4Q03013 218 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms