RNA–Protein interactions for RNA: ENST00000313352.11

PUF60-201, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUF60, Length 1,804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-201ENST00000313352 SEMA3CQ99985 751 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 WRAP53Q9BUR4 548 aaKnown RBP17.28■□□□□ 0.36
PUF60-201ENST00000313352 SCUBE2Q9NQ36 999 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 AASDHPPTQ9NRN7 309 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 DKK3Q9UBP4 350 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 COQ6Q9Y2Z9 468 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.28■□□□□ 0.36
PUF60-201ENST00000313352 SNX11Q9Y5W9 270 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 TMEM131Q92545 1883 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 TRPM6Q9BX84 2022 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 TSPAN11A1L157 253 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 CCDC66A2RUB6 948 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 GOLGA8CPA6NN73 597 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 MMP20O60882 483 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 MX2P20592 715 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 CLDN2P57739 230 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 BCL2L1Q07817 233 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 KIF19Q2TAC6 998 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 TIGD7Q6NT04 549 aaPredicted RBP17.28■□□□□ 0.36
PUF60-201ENST00000313352 ARRDC2Q8TBH0 407 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 PDCD6IPQ8WUM4 868 aaKnown RBP17.28■□□□□ 0.36
PUF60-201ENST00000313352 NSMCE1Q8WV22 266 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 RBM41Q96IZ5 413 aaKnown RBP17.28■□□□□ 0.36
PUF60-201ENST00000313352 ATP13A3Q9H7F0 1226 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 PCDH12Q9NPG4 1184 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 SEPT10Q9P0V9 454 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 SUSD2Q9UGT4 822 aa17.28■□□□□ 0.36
PUF60-201ENST00000313352 KNL1Q8NG31 2342 aa17.27■□□□□ 0.36
PUF60-201ENST00000313352 A0A1W2PR77 199 aa17.27■□□□□ 0.36
PUF60-201ENST00000313352 NEMP1O14524 444 aa17.27■□□□□ 0.36
PUF60-201ENST00000313352 PDHA1P08559 390 aa17.27■□□□□ 0.36
PUF60-201ENST00000313352 CCDC175P0C221 793 aa17.27■□□□□ 0.36
PUF60-201ENST00000313352 SERPINA4P29622 427 aa17.27■□□□□ 0.36
PUF60-201ENST00000313352 RENBPP51606 427 aa17.27■□□□□ 0.36
PUF60-201ENST00000313352 AFF3P51826 1226 aaKnown RBP17.27■□□□□ 0.36
PUF60-201ENST00000313352 RWDD2BP57060 319 aa17.27■□□□□ 0.36
PUF60-201ENST00000313352 UAP1L1Q3KQV9 507 aa17.27■□□□□ 0.36
PUF60-201ENST00000313352 PRPF39Q86UA1 669 aaKnown RBP17.27■□□□□ 0.36
PUF60-201ENST00000313352 MINDY1Q8N5J2 469 aa17.27■□□□□ 0.36
PUF60-201ENST00000313352 ZNF641Q96N77 438 aaPredicted RBP17.27■□□□□ 0.36
PUF60-201ENST00000313352 TUBGCP5Q96RT8 1024 aa17.27■□□□□ 0.36
PUF60-201ENST00000313352 PPP2R2CQ9Y2T4 447 aa17.27■□□□□ 0.36
PUF60-201ENST00000313352 LRRK1Q38SD2 2015 aa17.27■□□□□ 0.35
PUF60-201ENST00000313352 CACNA1EQ15878 2313 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 DCDC2BA2VCK2 349 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 UPK3BL1B0FP48 263 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 UPK3BL2E5RIL1 263 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 AP1G1O43747 822 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 KRT86O43790 486 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 ZFXP17010 805 aaPredicted RBP17.26■□□□□ 0.35
PUF60-201ENST00000313352 AP1S1P61966 158 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 RACK1P63244 317 aaKnown RBP17.26■□□□□ 0.35
PUF60-201ENST00000313352 TFDP2Q14188 446 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 PPP2R5EQ16537 467 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 HES6Q96HZ4 224 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 CALR3Q96L12 384 aaKnown RBP17.26■□□□□ 0.35
PUF60-201ENST00000313352 AGAP3Q96P47 875 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 IL12RB2Q99665 862 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 OSBPL8Q9BZF1 889 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 ANKRD6Q9Y2G4 727 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 ATP8A1Q9Y2Q0 1164 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 TCRBV7S2A1N4TA0A589 114 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 RIOK3O14730 519 aaKnown RBP17.26■□□□□ 0.35
PUF60-201ENST00000313352 HTRA2O43464 458 aaPredicted RBP17.26■□□□□ 0.35
PUF60-201ENST00000313352 MMP2P08253 660 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 TGM2P21980 687 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 DPP6P42658 865 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 CCDC15Q0P6D6 951 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 PDK1Q15118 436 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 PRKD1Q15139 912 aaPredicted RBP17.26■□□□□ 0.35
PUF60-201ENST00000313352 NEK5Q6P3R8 708 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 BBS12Q6ZW61 710 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 RNF10Q8N5U6 811 aaKnown RBP17.26■□□□□ 0.35
PUF60-201ENST00000313352 TMEM145Q8NBT3 493 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 FATE1Q969F0 183 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 FEM1CQ96JP0 617 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 PDLIM2Q96JY6 352 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 KLF6Q99612 283 aaPredicted RBP17.26■□□□□ 0.35
PUF60-201ENST00000313352 SLC17A9Q9BYT1 436 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 POLR1EQ9GZS1 481 aaKnown RBP17.26■□□□□ 0.35
PUF60-201ENST00000313352 TMEM9BQ9NQ34 198 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 FNDC3AQ9Y2H6 1198 aaKnown RBP17.26■□□□□ 0.35
PUF60-201ENST00000313352 PCDHB9Q9Y5E1 797 aa17.26■□□□□ 0.35
PUF60-201ENST00000313352 TP53BP1Q12888 1972 aaPredicted RBP17.25■□□□□ 0.35
PUF60-201ENST00000313352 F5H423 210 aaPredicted RBP17.25■□□□□ 0.35
PUF60-201ENST00000313352 CD38P28907 300 aa17.25■□□□□ 0.35
PUF60-201ENST00000313352 HSPA9P38646 679 aaKnown RBP17.25■□□□□ 0.35
PUF60-201ENST00000313352 GRIA4P48058 902 aa17.25■□□□□ 0.35
PUF60-201ENST00000313352 IFI35P80217 286 aaPredicted RBP17.25■□□□□ 0.35
PUF60-201ENST00000313352 RALGDSQ12967 914 aa17.25■□□□□ 0.35
PUF60-201ENST00000313352 HLA-BQ31612 363 aa17.25■□□□□ 0.35
PUF60-201ENST00000313352 CFAP58Q5T655 872 aa17.25■□□□□ 0.35
PUF60-201ENST00000313352 ALG1LQ6GMV1 187 aa17.25■□□□□ 0.35
PUF60-201ENST00000313352 NAPEPLDQ6IQ20 393 aa17.25■□□□□ 0.35
PUF60-201ENST00000313352 ADAT2Q7Z6V5 191 aaKnown RBP17.25■□□□□ 0.35
PUF60-201ENST00000313352 SYCE1Q8N0S2 351 aa17.25■□□□□ 0.35
PUF60-201ENST00000313352 BBS5Q8N3I7 341 aa17.25■□□□□ 0.35
PUF60-201ENST00000313352 TXLNBQ8N3L3 684 aa17.25■□□□□ 0.35
PUF60-201ENST00000313352 NETO1Q8TDF5 533 aa17.25■□□□□ 0.35
PUF60-201ENST00000313352 P3H4Q92791 437 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms